Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: QBS47880.1 opsin-like protein [Tripedalia cystophora] ... Query length: 329 aa

melanopsin-A ...

melanopsin-A [Danio rerio]

593 aa protein

accession:NP_001122233.1

Alignment Sequence Identical proteins

rhodopsin isoform X1 ...

rhodopsin isoform X1 [Mus musculus]

344 aa protein

accession:XP_006505923.1

Alignment Sequence Identical proteins

extra-ocular rhodopsin ...

extra-ocular rhodopsin [Danio rerio]

354 aa protein

accession:NP_571287.1

Alignment Sequence Identical proteins

rhodopsin ...

rhodopsin [Homo sapiens]

348 aa protein

accession:NP_000530.1

Alignment Sequence Identical proteins

Query: opsin-like protein ...

opsin-like protein [Tripedalia cystophora]

329 aa protein

accession:QBS47880.1

Sequence Identical proteins

opsin-3 ...

opsin-3 [Danio rerio]

387 aa protein

accession:NP_001104634.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_571287.1\|	extra-ocular rhodopsin [Danio rerio]	162	162	95%	7e-46	31.65%	NP_571287.1
2 Select seq ref\|XP_006505923.1\|	rhodopsin isoform X1 [Mus musculus]	157	157	98%	4e-44	29.52%	XP_006505923.1
3 Select seq ref\|NP_000530.1\|	rhodopsin [Homo sapiens]	146	146	82%	6e-40	32.60%	NP_000530.1
4 Select seq NP_001122233.1	melanopsin-A [Danio rerio]	144	144	87%	3e-37	30.03%	NP_001122233.1
5 Select seq ref\|NP_001104634.1\|	opsin-3 [Danio rerio]	162	162	84%	2e-45	33.45%	NP_001104634.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments