Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: QCD25502.1 recombination activating protein 1 [Lygosoma tabonorum] ... Query length: 276 aa

DNA repair protein RAD16 ...

DNA repair protein RAD16 [Saccharomyces cerevisiae S288C]

790 aa protein

accession:NP_009672.1

Alignment Sequence Identical proteins

tripartite motif-containing protein 26 isoform X2 ...

tripartite motif-containing protein 26 isoform X2 [Rattus norvegicus]

564 aa protein

accession:XP_063135156.1

Alignment Sequence Identical proteins

RING zinc finger protein, putative ...

RING zinc finger protein, putative [Plasmodium falciparum 3D7]

875 aa protein

accession:XP_001351466.1

Alignment Sequence Identical proteins

Query: recombination activating protein 1 ...

recombination activating protein 1 [Lygosoma tabonorum]

276 aa protein

accession:QCD25502.1

Sequence Identical proteins

V(D)J recombination-activating protein 1 isoform X1 ...

V(D)J recombination-activating protein 1 isoform X1 [Homo sapiens]

1043 aa protein

accession:XP_047283340.1

Alignment Sequence Identical proteins

V(D)J recombination-activating protein 1 isoform X1 ...

V(D)J recombination-activating protein 1 isoform X1 [Danio rerio]

1057 aa protein

accession:XP_009296061.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_047283340.1\|	V(D)J recombination-activating protein 1 isoform X1 [Homo sapiens]	298	298	78%	5e-93	61.64%	XP_047283340.1
2 Select seq ref\|XP_009296061.1\|	V(D)J recombination-activating protein 1 isoform X1 [Danio rerio]	136	136	99%	3e-35	30.17%	XP_009296061.1
3 Select seq ref\|XP_001351466.1\|	RING zinc finger protein, putative [Plasmodium falciparum 3D7]	40.4	40.4	36%	0.007	28.00%	XP_001351466.1
4 Select seq ref\|NP_009672.1\|	DNA repair protein RAD16 [Saccharomyces cerevisiae S288C]	40.4	40.4	12%	0.008	40.00%	NP_009672.1
5 Select seq ref\|XP_063135156.1\|	tripartite motif-containing protein 26 isoform X2 [Rattus norvegicus]	36.2	36.2	14%	0.15	42.50%	XP_063135156.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments