Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
QDH76131.1
env protein [Porcine endogenous retrovirus]
...
Query length:
291 aa
DOMAINS: and other(s) domains
...
syncytin-B precursor
...
syncytin-B precursor [Mus musculus]
618 aa protein
accession:NP_001375420.1
env protein
...
env protein [Porcine endogenous retrovirus]
186 aa protein
accession:QDH76133.1
Query: env protein
...
env protein [Porcine endogenous retrovirus]
291 aa protein
accession:QDH76131.1
RecName: Full=ERV-H1 provirus ancestral Env polyprotein; AltName: Full=ERV-H/env62; AltName: Full=Envelope polyprotein; Short=Env protein; Contains: RecName: Full=Surface protein; Short=SU; Contains: RecName: Full=Transmembrane protein; Short=TM; Flags: Precursor
...
RecName: Full=ERV-H1 provirus ancestral Env polyprotein; AltName: Full=ERV-H/env62; AltName: Full=Envelope polyprotein; Short=Env protein; Contains: RecName: Full=Surface protein; Short=SU; Contains: RecName: Full=Transmembrane protein; Short=TM; Flags: Precursor [Pan troglodytes]
457 aa protein
accession:P61559.1
RecName: Full=HERV-H_2q24.3 provirus ancestral Env polyprotein; AltName: Full=Env protein HERV-H/p62; AltName: Full=Env protein HERV-H19; AltName: Full=Env protein HERV-Hcl.3; AltName: Full=Envelope polyprotein; AltName: Full=HERV-H/env62; Contains: RecName: Full=Surface protein; Short=SU; Contains: RecName: Full=Transmembrane protein; Short=TM; Flags: Precursor
...
RecName: Full=HERV-H_2q24.3 provirus ancestral Env polyprotein; AltName: Full=Env protein HERV-H/p62; AltName: Full=Env protein HERV-H19; AltName: Full=Env protein HERV-Hcl.3; AltName: Full=Envelope polyprotein; AltName: Full=HERV-H/env62; Contains: RecName: Full=Surface protein; Short=SU; Contains: RecName: Full=Transmembrane protein; Short=TM; Flags: Precursor [Homo sapiens]
584 aa protein
accession:Q9N2K0.1
envelope protein
...
envelope protein [HERV-H/env60]
563 aa protein
accession:CAB94193.2
DOMAINS: and other(s) domains
...
syncytin-B precursor [Mus musculus]
618 aa protein
accession:NP_001375420.1
env protein [Porcine endogenous retrovirus]
186 aa protein
accession:QDH76133.1
env protein [Porcine endogenous retrovirus]
291 aa protein
accession:QDH76131.1
RecName: Full=ERV-H1 provirus ancestral Env polyprotein; AltName: Full=ERV-H/env62; AltName: Full=Envelope polyprotein; Short=Env protein; Contains: RecName: Full=Surface protein; Short=SU; Contains: RecName: Full=Transmembrane protein; Short=TM; Flags: Precursor [Pan troglodytes]
457 aa protein
accession:P61559.1
RecName: Full=HERV-H_2q24.3 provirus ancestral Env polyprotein; AltName: Full=Env protein HERV-H/p62; AltName: Full=Env protein HERV-H19; AltName: Full=Env protein HERV-Hcl.3; AltName: Full=Envelope polyprotein; AltName: Full=HERV-H/env62; Contains: RecName: Full=Surface protein; Short=SU; Contains: RecName: Full=Transmembrane protein; Short=TM; Flags: Precursor [Homo sapiens]
584 aa protein
accession:Q9N2K0.1
envelope protein [HERV-H/env60]
563 aa protein
accession:CAB94193.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|---|
1 | 553 | 553 | 100% | 0.0 | 94.50% | P61559.1 | |
2 | 526 | 526 | 100% | 0.0 | 95.19% | Q9N2K0.1 | |
3 | 506 | 506 | 100% | 4e-175 | 92.44% | CAB94193.2 | |
4 | 303 | 303 | 56% | 9e-101 | 90.85% | QDH76133.1 | |
5 | 139 | 139 | 98% | 3e-36 | 34.15% | NP_001375420.1 |