Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
QDH76141.1
pol protein [Porcine endogenous retrovirus]
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Query length:
160 aa
DOMAINS: and other(s) domains
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Query: pol protein
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pol protein [Porcine endogenous retrovirus]
160 aa protein
accession:QDH76141.1
LOW QUALITY PROTEIN: uncharacterized protein LOC120103612
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LOW QUALITY PROTEIN: uncharacterized protein LOC120103612 [Rattus norvegicus]
1612 aa protein
accession:XP_038969294.2
LOW QUALITY PROTEIN: uncharacterized protein LOC120099632
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LOW QUALITY PROTEIN: uncharacterized protein LOC120099632 [Rattus norvegicus]
1729 aa protein
accession:XP_038956651.1
LOW QUALITY PROTEIN: uncharacterized protein LOC120093558
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LOW QUALITY PROTEIN: uncharacterized protein LOC120093558 [Rattus norvegicus]
1610 aa protein
accession:XP_063120484.1
uncharacterized protein Gm53480
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uncharacterized protein Gm53480 [Mus musculus]
1697 aa protein
accession:XP_036010828.1
LOW QUALITY PROTEIN: uncharacterized protein LOC102556957
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LOW QUALITY PROTEIN: uncharacterized protein LOC102556957 [Rattus norvegicus]
1460 aa protein
accession:XP_063136617.1
DOMAINS: and other(s) domains
...
pol protein [Porcine endogenous retrovirus]
160 aa protein
accession:QDH76141.1
LOW QUALITY PROTEIN: uncharacterized protein LOC120103612 [Rattus norvegicus]
1612 aa protein
accession:XP_038969294.2
LOW QUALITY PROTEIN: uncharacterized protein LOC120099632 [Rattus norvegicus]
1729 aa protein
accession:XP_038956651.1
LOW QUALITY PROTEIN: uncharacterized protein LOC120093558 [Rattus norvegicus]
1610 aa protein
accession:XP_063120484.1
uncharacterized protein Gm53480 [Mus musculus]
1697 aa protein
accession:XP_036010828.1
LOW QUALITY PROTEIN: uncharacterized protein LOC102556957 [Rattus norvegicus]
1460 aa protein
accession:XP_063136617.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 189 | 189 | 100% | 2e-55 | 59.15% | XP_038969294.2 | |
| 2 | 187 | 187 | 100% | 2e-54 | 59.01% | XP_036010828.1 | |
| 3 | 189 | 189 | 100% | 2e-55 | 59.15% | XP_063120484.1 | |
| 4 | 189 | 189 | 100% | 3e-55 | 63.19% | XP_063136617.1 | |
| 5 | 186 | 186 | 100% | 3e-54 | 57.32% | XP_038956651.1 |