Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
QIQ08543.1
DNA-dependent RNA polymerase subunit RPB2 [Carcinus maenas virus 1]
...
Query length:
1041 aa
DOMAINS: and other(s) domains
...
Query: DNA-dependent RNA polymerase subunit RPB2
...
DNA-dependent RNA polymerase subunit RPB2 [Carcinus maenas virus 1]
1041 aa protein
accession:QIQ08543.1
DNA-directed RNA polymerase subunit B
...
DNA-directed RNA polymerase subunit B [Methanothermobacter thermautotrophicus]
603 aa protein
accession:WP_010876676.1
DNA-directed RNA polymerase II subunit RPB2
...
DNA-directed RNA polymerase II subunit RPB2 [Glycine max]
1192 aa protein
accession:XP_003533774.1
DNA-directed RNA polymerase III core subunit RET1
...
DNA-directed RNA polymerase III core subunit RET1 [Saccharomyces cerevisiae S288C]
1149 aa protein
accession:NP_014850.1
DNA-directed RNA polymerase III complex subunit Rpc2
...
DNA-directed RNA polymerase III complex subunit Rpc2 [Schizosaccharomyces pombe]
1165 aa protein
accession:NP_593690.1
DNA-directed RNA polymerase subunit beta
...
DNA-directed RNA polymerase subunit beta [Caenorhabditis elegans]
1154 aa protein
accession:NP_498192.2
DOMAINS: and other(s) domains
...
DNA-dependent RNA polymerase subunit RPB2 [Carcinus maenas virus 1]
1041 aa protein
accession:QIQ08543.1
DNA-directed RNA polymerase subunit B [Methanothermobacter thermautotrophicus]
603 aa protein
accession:WP_010876676.1
DNA-directed RNA polymerase II subunit RPB2 [Glycine max]
1192 aa protein
accession:XP_003533774.1
DNA-directed RNA polymerase III core subunit RET1 [Saccharomyces cerevisiae S288C]
1149 aa protein
accession:NP_014850.1
DNA-directed RNA polymerase III complex subunit Rpc2 [Schizosaccharomyces pombe]
1165 aa protein
accession:NP_593690.1
DNA-directed RNA polymerase subunit beta [Caenorhabditis elegans]
1154 aa protein
accession:NP_498192.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 123 | 123 | 31% | 9e-28 | 28.98% | WP_010876676.1 | |
| 2 | 123 | 123 | 31% | 3e-27 | 27.68% | NP_014850.1 | |
| 3 | 113 | 113 | 31% | 6e-24 | 27.46% | NP_593690.1 | |
| 4 | 108 | 155 | 42% | 1e-22 | 25.20% | XP_003533774.1 | |
| 5 | 108 | 155 | 50% | 2e-22 | 26.46% | NP_498192.2 |