Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: QJC63493.1 polyprotein [Cacao swollen shoot CD virus] ... Query length: 1869 aa

Query: polyprotein ...

polyprotein [Cacao swollen shoot CD virus]

1869 aa protein

accession:QJC63493.1

Sequence Identical proteins

gag-pol fusion protein ...

gag-pol fusion protein [Saccharomyces cerevisiae S288C]

1547 aa protein

accession:NP_011624.1

Alignment Sequence Identical proteins

uncharacterized protein LOC106796480 ...

uncharacterized protein LOC106796480 [Glycine max]

1860 aa protein

accession:XP_040866329.1

Alignment Sequence Identical proteins

retrotransposable element/transposon Tf2-type ...

retrotransposable element/transposon Tf2-type [Schizosaccharomyces pombe]

1333 aa protein

accession:NP_001018276.1

Alignment Sequence Identical proteins

retrovirus-related Pol polyprotein from transposon opus [Danio rerio]

1737 aa protein

accession:XP_021323077.1

Alignment Sequence Identical proteins

hypothetical protein DDB_G0294236 ...

hypothetical protein DDB_G0294236 [Dictyostelium discoideum AX4]

1386 aa protein

accession:XP_628775.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_011624.1\|	gag-pol fusion protein [Saccharomyces cerevisiae S288C]	190	190	23%	2e-47	31.29%	NP_011624.1
2 Select seq ref\|XP_021323077.1\|	retrovirus-related Pol polyprotein from transposon opus [Danio rerio]	189	189	24%	6e-47	31.40%	XP_021323077.1
3 Select seq ref\|XP_040866329.1\|	uncharacterized protein LOC106796480 [Glycine max]	164	164	22%	2e-39	28.77%	XP_040866329.1
4 Select seq ref\|NP_001018276.1\|	retrotransposable element/transposon Tf2-type [Schizosaccharomyces pombe]	152	152	24%	5e-36	27.93%	NP_001018276.1
5 Select seq ref\|XP_628775.1\|	hypothetical protein DDB_G0294236 [Dictyostelium discoideum AX4]	151	151	22%	2e-35	31.26%	XP_628775.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments