Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: QQX08172.1 recombination activating protein 1 [Chelonoidis denticulatus] ... Query length: 279 aa

zinc finger (C3HC4-type RING finger) family protein ...

zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana]

664 aa protein

accession:NP_001321213.1

Alignment Sequence Identical proteins

RING zinc finger protein, putative ...

RING zinc finger protein, putative [Plasmodium falciparum 3D7]

875 aa protein

accession:XP_001351466.1

Alignment Sequence Identical proteins

Query: recombination activating protein 1 ...

recombination activating protein 1 [Chelonoidis denticulatus]

279 aa protein

accession:QQX08172.1

Sequence Identical proteins

V(D)J recombination-activating protein 1 ...

V(D)J recombination-activating protein 1 [Homo sapiens]

1043 aa protein

accession:NP_000439.2

Alignment Sequence Identical proteins

V(D)J recombination-activating protein 1 ...

V(D)J recombination-activating protein 1 [Mus musculus]

1040 aa protein

accession:NP_033045.2

Alignment Sequence Identical proteins

V(D)J recombination-activating protein 1 isoform X1 ...

V(D)J recombination-activating protein 1 isoform X1 [Danio rerio]

1057 aa protein

accession:XP_005163033.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_000439.2\|	V(D)J recombination-activating protein 1 [Homo sapiens]	372	372	99%	1e-120	63.93%	NP_000439.2
2 Select seq ref\|NP_033045.2\|	V(D)J recombination-activating protein 1 [Mus musculus]	351	351	94%	2e-112	58.94%	NP_033045.2
3 Select seq ref\|XP_005163033.1\|	V(D)J recombination-activating protein 1 isoform X1 [Danio rerio]	166	166	84%	4e-45	34.66%	XP_005163033.1
4 Select seq ref\|XP_001351466.1\|	RING zinc finger protein, putative [Plasmodium falciparum 3D7]	53.1	53.1	30%	1e-06	33.33%	XP_001351466.1
5 Select seq ref\|NP_001321213.1\|	zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana]	46.2	46.2	49%	2e-04	25.00%	NP_001321213.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments