Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: QQX08259.1 recombination activating protein 1 [Graptemys caglei] ... Query length: 257 aa

LON peptidase N-terminal domain and RING finger protein 1 isoform X1 ...

LON peptidase N-terminal domain and RING finger protein 1 isoform X1 [Glycine max]

498 aa protein

accession:XP_006581976.1

Alignment Sequence Identical proteins

RING zinc finger protein, putative ...

RING zinc finger protein, putative [Plasmodium falciparum 3D7]

875 aa protein

accession:XP_001351466.1

Alignment Sequence Identical proteins

Query: recombination activating protein 1 ...

recombination activating protein 1 [Graptemys caglei]

257 aa protein

accession:QQX08259.1

Sequence Identical proteins

V(D)J recombination-activating protein 1 ...

V(D)J recombination-activating protein 1 [Mus musculus]

1040 aa protein

accession:NP_033045.2

Alignment Sequence Identical proteins

V(D)J recombination-activating protein 1 ...

V(D)J recombination-activating protein 1 [Homo sapiens]

1043 aa protein

accession:NP_000439.2

Alignment Sequence Identical proteins

V(D)J recombination-activating protein 1 isoform X1 ...

V(D)J recombination-activating protein 1 isoform X1 [Danio rerio]

1057 aa protein

accession:XP_005163033.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_000439.2\|	V(D)J recombination-activating protein 1 [Homo sapiens]	367	367	92%	3e-119	68.88%	NP_000439.2
2 Select seq ref\|NP_033045.2\|	V(D)J recombination-activating protein 1 [Mus musculus]	344	344	96%	2e-110	61.85%	NP_033045.2
3 Select seq ref\|XP_005163033.1\|	V(D)J recombination-activating protein 1 isoform X1 [Danio rerio]	163	163	91%	2e-44	32.94%	XP_005163033.1
4 Select seq ref\|XP_001351466.1\|	RING zinc finger protein, putative [Plasmodium falciparum 3D7]	51.6	51.6	32%	4e-06	32.14%	XP_001351466.1
5 Select seq ref\|XP_006581976.1\|	LON peptidase N-terminal domain and RING finger protein 1 isoform X1 [Glycine max]	47.0	47.0	35%	1e-04	27.78%	XP_006581976.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments