Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: QQX08286.1 recombination activating protein 1 [Graptemys nigrinoda nigrinoda] ... Query length: 157 aa

LON peptidase N-terminal domain and RING finger protein 1 isoform X2 ...

LON peptidase N-terminal domain and RING finger protein 1 isoform X2 [Glycine max]

486 aa protein

accession:XP_040872538.1

Alignment Sequence Identical proteins

Query: recombination activating protein 1 ...

recombination activating protein 1 [Graptemys nigrinoda nigrinoda]

157 aa protein

accession:QQX08286.1

Sequence Identical proteins

V(D)J recombination-activating protein 1 isoform X1 ...

V(D)J recombination-activating protein 1 isoform X1 [Danio rerio]

1057 aa protein

accession:XP_005163033.1

Alignment Sequence Identical proteins

V(D)J recombination-activating protein 1 ...

V(D)J recombination-activating protein 1 [Mus musculus]

1040 aa protein

accession:NP_033045.2

Alignment Sequence Identical proteins

V(D)J recombination-activating protein 1 ...

V(D)J recombination-activating protein 1 [Homo sapiens]

1043 aa protein

accession:NP_000439.2

Alignment Sequence Identical proteins

ATP-dependent helicase ...

ATP-dependent helicase [Schizosaccharomyces pombe]

963 aa protein

accession:NP_587701.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_000439.2\|	V(D)J recombination-activating protein 1 [Homo sapiens]	248	248	100%	4e-76	69.81%	NP_000439.2
2 Select seq ref\|NP_033045.2\|	V(D)J recombination-activating protein 1 [Mus musculus]	234	234	100%	5e-71	64.97%	NP_033045.2
3 Select seq ref\|XP_005163033.1\|	V(D)J recombination-activating protein 1 isoform X1 [Danio rerio]	104	104	98%	2e-25	32.16%	XP_005163033.1
4 Select seq ref\|XP_040872538.1\|	LON peptidase N-terminal domain and RING finger protein 1 isoform X2 [Glycine max]	48.9	48.9	57%	5e-06	27.78%	XP_040872538.1
5 Select seq ref\|NP_587701.1\|	ATP-dependent helicase [Schizosaccharomyces pombe]	48.1	48.1	43%	1e-05	30.14%	NP_587701.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments