Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
RLV89620.1
hypothetical protein JA1_005062 [Spathaspora sp. JA1]
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Query length:
415 aa
DOMAINS: and other(s) domains
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RNA polymerase II transcription termination factor
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RNA polymerase II transcription termination factor [Schizosaccharomyces pombe]
387 aa protein
accession:NP_595404.1
uncharacterized protein LOC100814308 isoform X5
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uncharacterized protein LOC100814308 isoform X5 [Glycine max]
523 aa protein
accession:XP_003521863.1
regulation of nuclear pre-mRNA domain-containing protein 1B isoform X3
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regulation of nuclear pre-mRNA domain-containing protein 1B isoform X3 [Mus musculus]
219 aa protein
accession:XP_030107929.1
regulation of nuclear pre-mRNA domain-containing protein 1B isoform X3
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regulation of nuclear pre-mRNA domain-containing protein 1B isoform X3 [Danio rerio]
330 aa protein
accession:XP_005162480.1
Query: hypothetical protein JA1_005062
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hypothetical protein JA1_005062 [Spathaspora sp. JA1]
415 aa protein
accession:RLV89620.1
Rtt103p
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Rtt103p [Saccharomyces cerevisiae S288C]
409 aa protein
accession:NP_010575.1
DOMAINS: and other(s) domains
...
RNA polymerase II transcription termination factor [Schizosaccharomyces pombe]
387 aa protein
accession:NP_595404.1
uncharacterized protein LOC100814308 isoform X5 [Glycine max]
523 aa protein
accession:XP_003521863.1
regulation of nuclear pre-mRNA domain-containing protein 1B isoform X3 [Mus musculus]
219 aa protein
accession:XP_030107929.1
regulation of nuclear pre-mRNA domain-containing protein 1B isoform X3 [Danio rerio]
330 aa protein
accession:XP_005162480.1
hypothetical protein JA1_005062 [Spathaspora sp. JA1]
415 aa protein
accession:RLV89620.1
Rtt103p [Saccharomyces cerevisiae S288C]
409 aa protein
accession:NP_010575.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 91.3 | 91.3 | 34% | 2e-18 | 33.80% | XP_003521863.1 | |
| 2 | 89.7 | 89.7 | 28% | 3e-18 | 43.44% | NP_595404.1 | |
| 3 | 89.7 | 89.7 | 30% | 3e-18 | 36.43% | NP_010575.1 | |
| 4 | 86.3 | 86.3 | 32% | 4e-18 | 33.58% | XP_030107929.1 | |
| 5 | 87.8 | 87.8 | 65% | 7e-18 | 24.76% | XP_005162480.1 |