Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
SCW28787.1
Helix-turn-helix domain-containing protein [Ruminococcaceae bacterium YRB3002]
...
Query length:
97 aa
DOMAINS: and other(s) domains
...
acetate metabolism transcriptional regulator RamB
...
acetate metabolism transcriptional regulator RamB [Mycobacterium]
474 aa protein
accession:WP_003898467.1
helix-turn-helix transcriptional regulator
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helix-turn-helix transcriptional regulator [Clostridioides difficile]
65 aa protein
accession:WP_003438035.1
helix-turn-helix domain-containing protein
...
helix-turn-helix domain-containing protein [Pseudomonas]
199 aa protein
accession:WP_003095727.1
Query: Helix-turn-helix domain-containing protein
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Helix-turn-helix domain-containing protein [Ruminococcaceae bacterium YRB3002]
97 aa protein
accession:SCW28787.1
ImmA/IrrE family metallo-endopeptidase
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ImmA/IrrE family metallo-endopeptidase [Mycobacterium tuberculosis]
346 aa protein
accession:WP_003911735.1
LexA family transcriptional regulator
...
LexA family transcriptional regulator [Escherichia coli]
214 aa protein
accession:WP_000444607.1
DOMAINS: and other(s) domains
...
acetate metabolism transcriptional regulator RamB [Mycobacterium]
474 aa protein
accession:WP_003898467.1
helix-turn-helix transcriptional regulator [Clostridioides difficile]
65 aa protein
accession:WP_003438035.1
helix-turn-helix domain-containing protein [Pseudomonas]
199 aa protein
accession:WP_003095727.1
Helix-turn-helix domain-containing protein [Ruminococcaceae bacterium YRB3002]
97 aa protein
accession:SCW28787.1
ImmA/IrrE family metallo-endopeptidase [Mycobacterium tuberculosis]
346 aa protein
accession:WP_003911735.1
LexA family transcriptional regulator [Escherichia coli]
214 aa protein
accession:WP_000444607.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 38.9 | 38.9 | 55% | 0.001 | 31.48% | WP_003898467.1 | |
| 2 | 38.5 | 38.5 | 55% | 0.001 | 42.59% | WP_003911735.1 | |
| 3 | 37.0 | 37.0 | 54% | 0.005 | 42.59% | WP_000444607.1 | |
| 4 | 35.0 | 35.0 | 55% | 0.006 | 33.33% | WP_003438035.1 | |
| 5 | 34.3 | 34.3 | 65% | 0.038 | 34.38% | WP_003095727.1 |