Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
SPO18260.1
MHC class II antigen [Gallinula comeri]
...
Query length:
92 aa
DOMAINS: and other(s) domains
...
major histocompatibility complex class II DAB precursor
...
major histocompatibility complex class II DAB precursor [Danio rerio]
250 aa protein
accession:NP_571551.3
RT1 class II, DO beta isoform 2 precursor
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RT1 class II, DO beta isoform 2 precursor [Rattus norvegicus]
246 aa protein
accession:NP_001399123.1
Query: MHC class II antigen
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MHC class II antigen [Gallinula comeri]
92 aa protein
accession:SPO18260.1
major histocompatibility complex, class II, DR beta 4 isoform X4
...
major histocompatibility complex, class II, DR beta 4 isoform X4 [Homo sapiens]
158 aa protein
accession:XP_054186563.1
major histocompatibility complex, class II, DR beta 4 isoform X3
...
major histocompatibility complex, class II, DR beta 4 isoform X3 [Homo sapiens]
172 aa protein
accession:XP_054186562.1
major histocompatibility complex, class II, DR beta 4 isoform X2
...
major histocompatibility complex, class II, DR beta 4 isoform X2 [Homo sapiens]
225 aa protein
accession:XP_054186561.1
DOMAINS: and other(s) domains
...
major histocompatibility complex class II DAB precursor [Danio rerio]
250 aa protein
accession:NP_571551.3
RT1 class II, DO beta isoform 2 precursor [Rattus norvegicus]
246 aa protein
accession:NP_001399123.1
MHC class II antigen [Gallinula comeri]
92 aa protein
accession:SPO18260.1
major histocompatibility complex, class II, DR beta 4 isoform X4 [Homo sapiens]
158 aa protein
accession:XP_054186563.1
major histocompatibility complex, class II, DR beta 4 isoform X3 [Homo sapiens]
172 aa protein
accession:XP_054186562.1
major histocompatibility complex, class II, DR beta 4 isoform X2 [Homo sapiens]
225 aa protein
accession:XP_054186561.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 101 | 101 | 90% | 6e-28 | 57.83% | XP_054186563.1 | |
| 2 | 91.7 | 91.7 | 89% | 2e-23 | 51.22% | NP_001399123.1 | |
| 3 | 41.2 | 41.2 | 88% | 1e-04 | 30.49% | NP_571551.3 | |
| 4 | 101 | 101 | 90% | 8e-28 | 57.83% | XP_054186562.1 | |
| 5 | 100 | 100 | 90% | 6e-27 | 57.83% | XP_054186561.1 |