Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: UVH40188.1 Smc1 protein [Tricholoma vaccinum] ... Query length: 88 aa

hypothetical protein, conserved ...

hypothetical protein, conserved [Leishmania donovani]

1600 aa protein

accession:XP_003860675.1

Alignment Sequence Identical proteins

Query: Smc1 protein ...

Smc1 protein [Tricholoma vaccinum]

88 aa protein

accession:UVH40188.1

Sequence Identical proteins

mitotic/meiotic cohesin complex ATPase subunit Psm1/Smc1 ...

mitotic/meiotic cohesin complex ATPase subunit Psm1/Smc1 [Schizosaccharomyces pombe]

1228 aa protein

accession:NP_596049.2

Alignment Sequence Identical proteins

cohesin subunit SMC1 ...

cohesin subunit SMC1 [Saccharomyces cerevisiae S288C]

1225 aa protein

accession:NP_116647.1

Alignment Sequence Identical proteins

structural maintenance of chromosomes protein 1B ...

structural maintenance of chromosomes protein 1B [Danio rerio]

1234 aa protein

accession:XP_068073614.1

Alignment Sequence Identical proteins

structural maintenance of chromosome protein ...

structural maintenance of chromosome protein [Dictyostelium discoideum AX4]

1373 aa protein

accession:XP_629977.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_596049.2\|	mitotic/meiotic cohesin complex ATPase subunit Psm1/Smc1 [Schizosaccharomyces pombe]	146	146	100%	2e-41	77.27%	NP_596049.2
2 Select seq ref\|NP_116647.1\|	cohesin subunit SMC1 [Saccharomyces cerevisiae S288C]	132	132	100%	2e-36	70.45%	NP_116647.1
3 Select seq ref\|XP_068073614.1\|	structural maintenance of chromosomes protein 1B [Danio rerio]	115	115	98%	8e-31	62.07%	XP_068073614.1
4 Select seq ref\|XP_629977.1\|	structural maintenance of chromosome protein [Dictyostelium discoideum AX4]	100	100	100%	1e-25	53.41%	XP_629977.1
5 Select seq ref\|XP_003860675.1\|	hypothetical protein, conserved [Leishmania donovani]	96.7	96.7	100%	4e-24	48.86%	XP_003860675.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments