Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
UVH40228.1
Smc1 protein [Pseudotricholoma metapodium]
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Query length:
88 aa
DOMAINS: and other(s) domains
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mitotic/meiotic cohesin complex ATPase subunit Psm1/Smc1
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mitotic/meiotic cohesin complex ATPase subunit Psm1/Smc1 [Schizosaccharomyces pombe]
1228 aa protein
accession:NP_596049.2
Query: Smc1 protein
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Smc1 protein [Pseudotricholoma metapodium]
88 aa protein
accession:UVH40228.1
structural maintenance of chromosomes protein 1A isoform X1
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structural maintenance of chromosomes protein 1A isoform X1 [Mus musculus]
1099 aa protein
accession:XP_006528903.1
structural maintenance of chromosomes protein 1A isoform 2
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structural maintenance of chromosomes protein 1A isoform 2 [Homo sapiens]
1211 aa protein
accession:NP_001268392.1
structural maintenance of chromosomes protein 1A
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structural maintenance of chromosomes protein 1A [Danio rerio]
1232 aa protein
accession:NP_001155103.1
Structural maintenance of chromosomes protein 1
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Structural maintenance of chromosomes protein 1 [Caenorhabditis elegans]
140 aa protein
accession:NP_001040659.1
DOMAINS: and other(s) domains
...
mitotic/meiotic cohesin complex ATPase subunit Psm1/Smc1 [Schizosaccharomyces pombe]
1228 aa protein
accession:NP_596049.2
Smc1 protein [Pseudotricholoma metapodium]
88 aa protein
accession:UVH40228.1
structural maintenance of chromosomes protein 1A isoform X1 [Mus musculus]
1099 aa protein
accession:XP_006528903.1
structural maintenance of chromosomes protein 1A isoform 2 [Homo sapiens]
1211 aa protein
accession:NP_001268392.1
structural maintenance of chromosomes protein 1A [Danio rerio]
1232 aa protein
accession:NP_001155103.1
Structural maintenance of chromosomes protein 1 [Caenorhabditis elegans]
140 aa protein
accession:NP_001040659.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 152 | 152 | 100% | 4e-43 | 77.27% | NP_596049.2 | |
| 2 | 134 | 134 | 98% | 5e-37 | 72.41% | XP_006528903.1 | |
| 3 | 134 | 134 | 98% | 6e-37 | 72.41% | NP_001268392.1 | |
| 4 | 134 | 134 | 98% | 6e-37 | 72.41% | NP_001155103.1 | |
| 5 | 123 | 123 | 98% | 1e-36 | 65.52% | NP_001040659.1 |