Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: UXQ07615.1 splicing factor 3B subunit 1 isoform 1 [Homo sapiens] ... Query length: 29 aa

splicing factor 3B subunit 1, putative ...

splicing factor 3B subunit 1, putative [Plasmodium falciparum 3D7]

1386 aa protein

accession:XP_001351163.1

Alignment Sequence Identical proteins

Query: splicing factor 3B subunit 1 isoform 1 ...

splicing factor 3B subunit 1 isoform 1 [Homo sapiens]

29 aa protein

accession:UXQ07615.1

Sequence Identical proteins

splicing factor 3B subunit 1 isoform X2 ...

splicing factor 3B subunit 1 isoform X2 [Danio rerio]

1161 aa protein

accession:XP_005167845.1

Alignment Sequence Identical proteins

splicing factor 3B subunit 1 ...

splicing factor 3B subunit 1 [Mus musculus]

1304 aa protein

accession:NP_112456.2

Alignment Sequence Identical proteins

splicing factor 3B subunit 1 isoform X1 ...

splicing factor 3B subunit 1 isoform X1 [Rattus norvegicus]

1158 aa protein

accession:XP_017452143.1

Alignment Sequence Identical proteins

Splicing factor 3B subunit 1 domain-containing protein ...

Splicing factor 3B subunit 1 domain-containing protein [Caenorhabditis elegans]

1322 aa protein

accession:NP_497853.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_005167845.1\|	splicing factor 3B subunit 1 isoform X2 [Danio rerio]	60.5	60.5	100%	4e-12	100.00%	XP_005167845.1
2 Select seq ref\|NP_112456.2\|	splicing factor 3B subunit 1 [Mus musculus]	60.5	60.5	100%	4e-12	100.00%	NP_112456.2
3 Select seq ref\|XP_017452143.1\|	splicing factor 3B subunit 1 isoform X1 [Rattus norvegicus]	60.5	60.5	100%	4e-12	100.00%	XP_017452143.1
4 Select seq ref\|NP_497853.1\|	Splicing factor 3B subunit 1 domain-containing protein [Caenorhabditis elegans]	60.5	60.5	100%	5e-12	100.00%	NP_497853.1
5 Select seq ref\|XP_001351163.1\|	splicing factor 3B subunit 1, putative [Plasmodium falciparum 3D7]	58.9	58.9	100%	1e-11	100.00%	XP_001351163.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments