Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
VDN00807.1
unnamed protein product [Thelazia callipaeda]
...
Query length:
2056 aa
DOMAINS: and other(s) domains
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Mediator of RNA polymerase II transcription subunit 23
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Mediator of RNA polymerase II transcription subunit 23 [Caenorhabditis elegans]
1587 aa protein
accession:NP_493575.2
Query: unnamed protein product
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unnamed protein product [Thelazia callipaeda]
2056 aa protein
accession:VDN00807.1
mediator of RNA polymerase II transcription subunit 23 isoform f
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mediator of RNA polymerase II transcription subunit 23 isoform f [Homo sapiens]
1350 aa protein
accession:NP_001363447.1
mediator of RNA polymerase II transcription subunit 23 isoform 1
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mediator of RNA polymerase II transcription subunit 23 isoform 1 [Mus musculus]
1373 aa protein
accession:NP_001159888.2
mediator of RNA polymerase II transcription subunit 23 isoform X1
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mediator of RNA polymerase II transcription subunit 23 isoform X1 [Rattus norvegicus]
1376 aa protein
accession:XP_008756834.1
mediator of RNA polymerase II transcription subunit 23 isoform X3
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mediator of RNA polymerase II transcription subunit 23 isoform X3 [Danio rerio]
1386 aa protein
accession:XP_005160392.1
DOMAINS: and other(s) domains
...
Mediator of RNA polymerase II transcription subunit 23 [Caenorhabditis elegans]
1587 aa protein
accession:NP_493575.2
unnamed protein product [Thelazia callipaeda]
2056 aa protein
accession:VDN00807.1
mediator of RNA polymerase II transcription subunit 23 isoform f [Homo sapiens]
1350 aa protein
accession:NP_001363447.1
mediator of RNA polymerase II transcription subunit 23 isoform 1 [Mus musculus]
1373 aa protein
accession:NP_001159888.2
mediator of RNA polymerase II transcription subunit 23 isoform X1 [Rattus norvegicus]
1376 aa protein
accession:XP_008756834.1
mediator of RNA polymerase II transcription subunit 23 isoform X3 [Danio rerio]
1386 aa protein
accession:XP_005160392.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 426 | 426 | 65% | 5e-121 | 25.53% | NP_493575.2 | |
| 2 | 400 | 400 | 64% | 9e-114 | 25.93% | NP_001363447.1 | |
| 3 | 396 | 396 | 65% | 2e-112 | 26.32% | NP_001159888.2 | |
| 4 | 395 | 395 | 64% | 4e-112 | 25.95% | XP_005160392.1 | |
| 5 | 387 | 387 | 64% | 2e-109 | 26.23% | XP_008756834.1 |