Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WJL97673.1 polyprotein [Johnsongrass mosaic virus] ... Query length: 3053 aa

Query: polyprotein ...

polyprotein [Johnsongrass mosaic virus]

3053 aa protein

accession:WJL97673.1

Sequence Identical proteins

DEAD/DEAH box helicase ...

DEAD/DEAH box helicase [Dictyostelium discoideum AX4]

1106 aa protein

accession:XP_638017.1

Alignment Sequence Identical proteins

pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 ...

pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [Danio rerio]

1054 aa protein

accession:NP_956318.1

Alignment Sequence Identical proteins

pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22, putative ...

pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22, putative [Plasmodium falciparum 3D7]

1290 aa protein

accession:XP_001347578.1

Alignment Sequence Identical proteins

probable ATP-dependent RNA helicase DHX40 isoform X1 ...

probable ATP-dependent RNA helicase DHX40 isoform X1 [Homo sapiens]

752 aa protein

accession:XP_006722146.1

Alignment Sequence Identical proteins

probable ATP-dependent RNA helicase DHX40 ...

probable ATP-dependent RNA helicase DHX40 [Mus musculus]

779 aa protein

accession:NP_080467.3

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|XP_638017.1\|	DEAD/DEAH box helicase [Dictyostelium discoideum AX4]	60.5	60.5	10%	3e-07	24.71%	XP_638017.1
2 Select seq ref\|XP_006722146.1\|	probable ATP-dependent RNA helicase DHX40 isoform X1 [Homo sapiens]	58.2	58.2	12%	2e-06	24.41%	XP_006722146.1
3 Select seq ref\|NP_080467.3\|	probable ATP-dependent RNA helicase DHX40 [Mus musculus]	57.4	57.4	11%	3e-06	24.82%	NP_080467.3
4 Select seq ref\|XP_001347578.1\|	pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22, putative [Plasmodium falciparum 3D7]	57.0	57.0	10%	5e-06	24.52%	XP_001347578.1
5 Select seq ref\|NP_956318.1\|	pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [Danio rerio]	55.8	55.8	9%	8e-06	24.06%	NP_956318.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments