Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WOC30343.1
gag-pol polyprotein [Porcine endogenous retrovirus B]
...
Query length:
1146 aa
DOMAINS: and other(s) domains
...
uncharacterized mitochondrial protein AtMg00860-like
...
uncharacterized mitochondrial protein AtMg00860-like [Homo sapiens]
257 aa protein
accession:XP_047289367.1
Query: gag-pol polyprotein
...
gag-pol polyprotein [Porcine endogenous retrovirus B]
1146 aa protein
accession:WOC30343.1
LOW QUALITY PROTEIN: uncharacterized protein LOC120099632
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LOW QUALITY PROTEIN: uncharacterized protein LOC120099632 [Rattus norvegicus]
1729 aa protein
accession:XP_038956651.1
uncharacterized protein Gm53480
...
uncharacterized protein Gm53480 [Mus musculus]
1697 aa protein
accession:XP_036010828.1
LOW QUALITY PROTEIN: uncharacterized protein LOC134484530
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LOW QUALITY PROTEIN: uncharacterized protein LOC134484530 [Rattus norvegicus]
1718 aa protein
accession:XP_063136755.1
LOW QUALITY PROTEIN: uncharacterized protein LOC134486339
...
LOW QUALITY PROTEIN: uncharacterized protein LOC134486339 [Rattus norvegicus]
1718 aa protein
accession:XP_063141299.1
DOMAINS: and other(s) domains
...
uncharacterized mitochondrial protein AtMg00860-like [Homo sapiens]
257 aa protein
accession:XP_047289367.1
gag-pol polyprotein [Porcine endogenous retrovirus B]
1146 aa protein
accession:WOC30343.1
LOW QUALITY PROTEIN: uncharacterized protein LOC120099632 [Rattus norvegicus]
1729 aa protein
accession:XP_038956651.1
uncharacterized protein Gm53480 [Mus musculus]
1697 aa protein
accession:XP_036010828.1
LOW QUALITY PROTEIN: uncharacterized protein LOC134484530 [Rattus norvegicus]
1718 aa protein
accession:XP_063136755.1
LOW QUALITY PROTEIN: uncharacterized protein LOC134486339 [Rattus norvegicus]
1718 aa protein
accession:XP_063141299.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1637 | 1637 | 98% | 0.0 | 71.99% | XP_038956651.1 | |
| 2 | 1595 | 1595 | 98% | 0.0 | 69.12% | XP_036010828.1 | |
| 3 | 253 | 253 | 21% | 9e-76 | 52.78% | XP_047289367.1 | |
| 4 | 1572 | 1572 | 98% | 0.0 | 67.72% | XP_063136755.1 | |
| 5 | 1570 | 1570 | 98% | 0.0 | 67.63% | XP_063141299.1 |