Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_000017203.1 helix-turn-helix domain-containing protein [Escherichia coli] ... Query length: 233 aa

transcriptional regulator MdrR1 ...

transcriptional regulator MdrR1 [Pseudomonas aeruginosa]

293 aa protein

accession:WP_010895665.1

Alignment Sequence Identical proteins

helix-turn-helix transcriptional regulator ...

helix-turn-helix transcriptional regulator [Streptomyces]

271 aa protein

accession:WP_375336288.1

Alignment Sequence Identical proteins

AraC family transcriptional regulator ...

AraC family transcriptional regulator [Mycobacterium]

344 aa protein

accession:WP_003407264.1

Alignment Sequence Identical proteins

helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Escherichia coli]

195 aa protein

accession:WP_001302296.1

Alignment Sequence Identical proteins

Query: helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Escherichia coli]

233 aa protein

accession:WP_000017203.1

Sequence Identical proteins

acid stress response transcriptional regulator YdeO ...

acid stress response transcriptional regulator YdeO [Enterobacteriaceae]

253 aa protein

accession:WP_000060465.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_000060465.1\|	acid stress response transcriptional regulator YdeO [Enterobacteriaceae]	128	128	96%	5e-35	32.48%	WP_000060465.1
2 Select seq ref\|WP_001302296.1\|	helix-turn-helix domain-containing protein [Escherichia coli]	81.6	81.6	76%	9e-18	32.09%	WP_001302296.1
3 Select seq ref\|WP_003407264.1\|	AraC family transcriptional regulator [Mycobacterium]	48.1	48.1	42%	4e-05	30.69%	WP_003407264.1
4 Select seq ref\|WP_375336288.1\|	helix-turn-helix transcriptional regulator [Streptomyces]	46.2	46.2	24%	1e-04	30.36%	WP_375336288.1
5 Select seq ref\|WP_010895665.1\|	transcriptional regulator MdrR1 [Pseudomonas aeruginosa]	43.5	43.5	21%	0.001	40.38%	WP_010895665.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments