Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_000024909.1
multidrug efflux pump RND permease MdtF [Escherichia coli]
...
Query length:
1037 aa
DOMAINS: and other(s) domains
...
multidrug efflux RND transporter permease subunit MtrD
...
multidrug efflux RND transporter permease subunit MtrD [Neisseria meningitidis]
1067 aa protein
accession:WP_082308689.1
multidrug efflux RND transporter permease subunit MexY
...
multidrug efflux RND transporter permease subunit MexY [Pseudomonas aeruginosa]
1045 aa protein
accession:WP_003113508.1
efflux RND transporter permease subunit
...
efflux RND transporter permease subunit [Shewanella oneidensis]
1044 aa protein
accession:WP_011074281.1
multidrug efflux RND transporter permease subunit MexB
...
multidrug efflux RND transporter permease subunit MexB [Pseudomonas]
1046 aa protein
accession:WP_003107312.1
Query: multidrug efflux pump RND permease MdtF
...
multidrug efflux pump RND permease MdtF [Escherichia coli]
1037 aa protein
accession:WP_000024909.1
multidrug efflux pump RND permease MdtF
...
multidrug efflux pump RND permease MdtF [Escherichia coli]
1037 aa protein
accession:WP_000024883.1
DOMAINS: and other(s) domains
...
multidrug efflux RND transporter permease subunit MtrD [Neisseria meningitidis]
1067 aa protein
accession:WP_082308689.1
multidrug efflux RND transporter permease subunit MexY [Pseudomonas aeruginosa]
1045 aa protein
accession:WP_003113508.1
efflux RND transporter permease subunit [Shewanella oneidensis]
1044 aa protein
accession:WP_011074281.1
multidrug efflux RND transporter permease subunit MexB [Pseudomonas]
1046 aa protein
accession:WP_003107312.1
multidrug efflux pump RND permease MdtF [Escherichia coli]
1037 aa protein
accession:WP_000024909.1
multidrug efflux pump RND permease MdtF [Escherichia coli]
1037 aa protein
accession:WP_000024883.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 2102 | 2102 | 100% | 0.0 | 99.71% | WP_000024883.1 | |
| 2 | 1323 | 1323 | 99% | 0.0 | 62.92% | WP_003107312.1 | |
| 3 | 1296 | 1296 | 99% | 0.0 | 60.95% | WP_011074281.1 | |
| 4 | 1020 | 1020 | 100% | 0.0 | 49.08% | WP_003113508.1 | |
| 5 | 959 | 959 | 99% | 0.0 | 48.23% | WP_082308689.1 |