Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_000060479.1
acid stress response transcriptional regulator YdeO [Enterobacteriaceae]
...
Query length:
253 aa
DOMAINS: and other(s) domains
...
helix-turn-helix transcriptional regulator
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helix-turn-helix transcriptional regulator [Shewanella oneidensis]
252 aa protein
accession:WP_011070684.1
helix-turn-helix transcriptional regulator
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helix-turn-helix transcriptional regulator [Neisseria meningitidis]
305 aa protein
accession:WP_002249477.1
AraC family transcriptional regulator
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AraC family transcriptional regulator [Mycobacterium]
263 aa protein
accession:WP_003912358.1
helix-turn-helix domain-containing protein
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helix-turn-helix domain-containing protein [Escherichia coli]
195 aa protein
accession:WP_000558952.1
Query: acid stress response transcriptional regulator YdeO
...
acid stress response transcriptional regulator YdeO [Enterobacteriaceae]
253 aa protein
accession:WP_000060479.1
acid stress response transcriptional regulator YdeO
...
acid stress response transcriptional regulator YdeO [Enterobacteriaceae]
253 aa protein
accession:WP_000060465.1
DOMAINS: and other(s) domains
...
helix-turn-helix transcriptional regulator [Shewanella oneidensis]
252 aa protein
accession:WP_011070684.1
helix-turn-helix transcriptional regulator [Neisseria meningitidis]
305 aa protein
accession:WP_002249477.1
AraC family transcriptional regulator [Mycobacterium]
263 aa protein
accession:WP_003912358.1
helix-turn-helix domain-containing protein [Escherichia coli]
195 aa protein
accession:WP_000558952.1
acid stress response transcriptional regulator YdeO [Enterobacteriaceae]
253 aa protein
accession:WP_000060479.1
acid stress response transcriptional regulator YdeO [Enterobacteriaceae]
253 aa protein
accession:WP_000060465.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 521 | 521 | 100% | 0.0 | 98.42% | WP_000060465.1 | |
| 2 | 96.7 | 96.7 | 73% | 4e-23 | 33.16% | WP_000558952.1 | |
| 3 | 54.3 | 54.3 | 37% | 3e-07 | 31.58% | WP_011070684.1 | |
| 4 | 53.5 | 53.5 | 31% | 5e-07 | 37.80% | WP_002249477.1 | |
| 5 | 53.1 | 53.1 | 36% | 7e-07 | 30.11% | WP_003912358.1 |