Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_000276631.1 BppU family phage baseplate upper protein [Staphylococcus aureus] ... Query length: 412 aa

Query: BppU family phage baseplate upper protein ...

BppU family phage baseplate upper protein [Staphylococcus aureus]

412 aa protein

accession:WP_000276631.1

Sequence Identical proteins

collagen alpha-1(III) chain preproprotein ...

collagen alpha-1(III) chain preproprotein [Homo sapiens]

1466 aa protein

accession:NP_000081.2

Alignment Sequence Identical proteins

collagen alpha-5(IV) chain isoform X3 ...

collagen alpha-5(IV) chain isoform X3 [Mus musculus]

1676 aa protein

accession:XP_017173861.1

Alignment Sequence Identical proteins

collagen alpha-5(IV) chain isoform 2 precursor ...

collagen alpha-5(IV) chain isoform 2 precursor [Mus musculus]

1685 aa protein

accession:NP_001398876.1

Alignment Sequence Identical proteins

viking, isoform B ...

viking, isoform B [Drosophila melanogaster]

1940 aa protein

accession:NP_001260071.1

Alignment Sequence Identical proteins

collagen alpha-1(XXVII) chain B precursor ...

collagen alpha-1(XXVII) chain B precursor [Danio rerio]

1658 aa protein

accession:NP_001074044.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_000081.2\|	collagen alpha-1(III) chain preproprotein [Homo sapiens]	46.6	251	11%	4e-04	55.26%	NP_000081.2
2 Select seq ref\|XP_017173861.1\|	collagen alpha-5(IV) chain isoform X3 [Mus musculus]	46.2	160	9%	6e-04	60.61%	XP_017173861.1
3 Select seq ref\|NP_001074044.1\|	collagen alpha-1(XXVII) chain B precursor [Danio rerio]	46.2	440	19%	7e-04	55.56%	NP_001074044.1
4 Select seq ref\|NP_001260071.1\|	viking, isoform B [Drosophila melanogaster]	44.7	434	15%	0.002	57.58%	NP_001260071.1
5 Select seq ref\|NP_001398876.1\|	collagen alpha-5(IV) chain isoform 2 precursor [Mus musculus]	46.2	160	9%	6e-04	60.61%	NP_001398876.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments