Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_000481516.1
biofilm master transcriptional regulator CsgD [Salmonella]
...
Query length:
208 aa
DOMAINS: and other(s) domains
...
LuxR C-terminal-related transcriptional regulator
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LuxR C-terminal-related transcriptional regulator [Shewanella oneidensis]
211 aa protein
accession:WP_011072669.1
response regulator transcription factor
...
response regulator transcription factor [Streptomyces]
224 aa protein
accession:WP_011030258.1
two-component system response regulator YhcZ
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two-component system response regulator YhcZ [Bacillaceae]
214 aa protein
accession:WP_003245647.1
helix-turn-helix transcriptional regulator
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helix-turn-helix transcriptional regulator [Pseudomonas aeruginosa]
907 aa protein
accession:WP_003113574.1
Query: biofilm master transcriptional regulator CsgD
...
biofilm master transcriptional regulator CsgD [Salmonella]
208 aa protein
accession:WP_000481516.1
biofilm master transcriptional regulator CsgD
...
biofilm master transcriptional regulator CsgD [Enterobacteriaceae]
216 aa protein
accession:WP_000481500.1
DOMAINS: and other(s) domains
...
LuxR C-terminal-related transcriptional regulator [Shewanella oneidensis]
211 aa protein
accession:WP_011072669.1
response regulator transcription factor [Streptomyces]
224 aa protein
accession:WP_011030258.1
two-component system response regulator YhcZ [Bacillaceae]
214 aa protein
accession:WP_003245647.1
helix-turn-helix transcriptional regulator [Pseudomonas aeruginosa]
907 aa protein
accession:WP_003113574.1
biofilm master transcriptional regulator CsgD [Salmonella]
208 aa protein
accession:WP_000481516.1
biofilm master transcriptional regulator CsgD [Enterobacteriaceae]
216 aa protein
accession:WP_000481500.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 404 | 404 | 100% | 8e-145 | 92.79% | WP_000481500.1 | |
| 2 | 87.0 | 87.0 | 75% | 3e-20 | 33.33% | WP_011072669.1 | |
| 3 | 73.6 | 73.6 | 74% | 4e-15 | 30.38% | WP_011030258.1 | |
| 4 | 72.8 | 72.8 | 53% | 5e-15 | 35.34% | WP_003245647.1 | |
| 5 | 63.2 | 63.2 | 26% | 9e-11 | 51.79% | WP_003113574.1 |