Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_000548082.1 helix-turn-helix transcriptional regulator [Salmonella] ... Query length: 259 aa

helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Streptococcus pneumoniae]

330 aa protein

accession:WP_000122904.1

Alignment Sequence Identical proteins

acid resistance transcriptional activator GadW ...

acid resistance transcriptional activator GadW [Enterobacteriaceae]

242 aa protein

accession:WP_000149999.1

Alignment Sequence Identical proteins

helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Escherichia coli]

195 aa protein

accession:WP_001302296.1

Alignment Sequence Identical proteins

Query: helix-turn-helix transcriptional regulator ...

helix-turn-helix transcriptional regulator [Salmonella]

259 aa protein

accession:WP_000548082.1

Sequence Identical proteins

helix-turn-helix transcriptional regulator ...

helix-turn-helix transcriptional regulator [Shewanella oneidensis]

252 aa protein

accession:WP_011070684.1

Alignment Sequence Identical proteins

AraC family transcriptional regulator ...

AraC family transcriptional regulator [Pseudomonas]

342 aa protein

accession:WP_003097554.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_011070684.1\|	helix-turn-helix transcriptional regulator [Shewanella oneidensis]	128	128	92%	1e-34	29.71%	WP_011070684.1
2 Select seq ref\|WP_000149999.1\|	acid resistance transcriptional activator GadW [Enterobacteriaceae]	74.7	74.7	43%	1e-14	35.71%	WP_000149999.1
3 Select seq ref\|WP_001302296.1\|	helix-turn-helix domain-containing protein [Escherichia coli]	53.9	53.9	37%	2e-07	31.96%	WP_001302296.1
4 Select seq ref\|WP_003097554.1\|	AraC family transcriptional regulator [Pseudomonas]	49.7	49.7	33%	1e-05	36.05%	WP_003097554.1
5 Select seq ref\|WP_000122904.1\|	helix-turn-helix domain-containing protein [Streptococcus pneumoniae]	48.1	48.1	27%	4e-05	37.14%	WP_000122904.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments