Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_000581031.1 helix-turn-helix domain-containing protein [Bacillus] ... Query length: 186 aa

helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Streptomyces]

141 aa protein

accession:WP_011029496.1

Alignment Sequence Identical proteins

Query: helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Bacillus]

186 aa protein

accession:WP_000581031.1

Sequence Identical proteins

helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Clostridioides difficile]

181 aa protein

accession:WP_004454415.1

Alignment Sequence Identical proteins

helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Methanothermobacter]

190 aa protein

accession:WP_010876297.1

Alignment Sequence Identical proteins

cupin domain-containing protein ...

cupin domain-containing protein [Pseudomonas]

182 aa protein

accession:WP_003096513.1

Alignment Sequence Identical proteins

helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Escherichia coli]

194 aa protein

accession:WP_000361110.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_004454415.1\|	helix-turn-helix domain-containing protein [Clostridioides difficile]	138	138	94%	3e-40	38.07%	WP_004454415.1
2 Select seq ref\|WP_010876297.1\|	helix-turn-helix domain-containing protein [Methanothermobacter]	63.2	63.2	98%	3e-11	27.23%	WP_010876297.1
3 Select seq ref\|WP_003096513.1\|	cupin domain-containing protein [Pseudomonas]	58.5	58.5	96%	1e-09	24.58%	WP_003096513.1
4 Select seq ref\|WP_011029496.1\|	helix-turn-helix domain-containing protein [Streptomyces]	57.0	57.0	42%	2e-09	35.44%	WP_011029496.1
5 Select seq ref\|WP_000361110.1\|	helix-turn-helix domain-containing protein [Escherichia coli]	56.6	56.6	82%	8e-09	24.36%	WP_000361110.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments