Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_000667546.1
multidrug efflux RND transporter permease subunit MdtC [Shigella sonnei]
...
Query length:
1025 aa
DOMAINS: and other(s) domains
...
efflux RND transporter permease subunit
...
efflux RND transporter permease subunit [Microcystis aeruginosa]
1100 aa protein
accession:WP_061432939.1
multidrug efflux RND transporter permease subunit MexY
...
multidrug efflux RND transporter permease subunit MexY [Pseudomonas aeruginosa]
1045 aa protein
accession:WP_003113508.1
efflux RND transporter permease subunit
...
efflux RND transporter permease subunit [Shewanella oneidensis]
1031 aa protein
accession:WP_011071991.1
multidrug efflux RND transporter permease subunit MuxC
...
multidrug efflux RND transporter permease subunit MuxC [Pseudomonas]
1036 aa protein
accession:WP_003089914.1
Query: multidrug efflux RND transporter permease subunit MdtC
...
multidrug efflux RND transporter permease subunit MdtC [Shigella sonnei]
1025 aa protein
accession:WP_000667546.1
multidrug efflux RND transporter permease subunit MdtC
...
multidrug efflux RND transporter permease subunit MdtC [Escherichia coli]
1025 aa protein
accession:WP_000667528.1
DOMAINS: and other(s) domains
...
efflux RND transporter permease subunit [Microcystis aeruginosa]
1100 aa protein
accession:WP_061432939.1
multidrug efflux RND transporter permease subunit MexY [Pseudomonas aeruginosa]
1045 aa protein
accession:WP_003113508.1
efflux RND transporter permease subunit [Shewanella oneidensis]
1031 aa protein
accession:WP_011071991.1
multidrug efflux RND transporter permease subunit MuxC [Pseudomonas]
1036 aa protein
accession:WP_003089914.1
multidrug efflux RND transporter permease subunit MdtC [Shigella sonnei]
1025 aa protein
accession:WP_000667546.1
multidrug efflux RND transporter permease subunit MdtC [Escherichia coli]
1025 aa protein
accession:WP_000667528.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 2063 | 2063 | 100% | 0.0 | 99.61% | WP_000667528.1 | |
| 2 | 1182 | 1182 | 98% | 0.0 | 62.87% | WP_003089914.1 | |
| 3 | 506 | 506 | 98% | 2e-161 | 32.45% | WP_011071991.1 | |
| 4 | 425 | 425 | 99% | 1e-130 | 30.46% | WP_003113508.1 | |
| 5 | 406 | 406 | 98% | 3e-123 | 30.04% | WP_061432939.1 |