Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_000793067.1 penicillin-binding protein PBP4 [Staphylococcus] ... Query length: 431 aa

Query: penicillin-binding protein PBP4 ...

penicillin-binding protein PBP4 [Staphylococcus]

431 aa protein

accession:WP_000793067.1

Sequence Identical proteins

D-alanyl-D-alanine carboxypeptidase PBP3 ...

D-alanyl-D-alanine carboxypeptidase PBP3 [Streptococcus pneumoniae]

413 aa protein

accession:WP_000719174.1

Alignment Sequence Identical proteins

D-alanyl-D-alanine carboxypeptidase ...

D-alanyl-D-alanine carboxypeptidase [Bacillaceae]

443 aa protein

accession:WP_009966224.1

Alignment Sequence Identical proteins

D-alanyl-D-alanine carboxypeptidase family protein ...

D-alanyl-D-alanine carboxypeptidase family protein [Clostridioides difficile]

394 aa protein

accession:WP_021373551.1

Alignment Sequence Identical proteins

unnamed protein product ...

unnamed protein product [Escherichia coli]

403 aa protein

accession:WP_001092082.1

Alignment Sequence Identical proteins

serine-type D-Ala-D-Ala carboxypeptidase DacD ...

serine-type D-Ala-D-Ala carboxypeptidase DacD [Enterobacteriaceae]

388 aa protein

accession:WP_001303036.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_000719174.1\|	D-alanyl-D-alanine carboxypeptidase PBP3 [Streptococcus pneumoniae]	127	127	62%	5e-31	32.10%	WP_000719174.1
2 Select seq ref\|WP_009966224.1\|	D-alanyl-D-alanine carboxypeptidase [Bacillaceae]	125	125	75%	2e-30	31.14%	WP_009966224.1
3 Select seq ref\|WP_021373551.1\|	D-alanyl-D-alanine carboxypeptidase family protein [Clostridioides difficile]	103	103	81%	6e-23	28.69%	WP_021373551.1
4 Select seq ref\|WP_001092082.1\|	unnamed protein product [Escherichia coli]	95.9	95.9	70%	4e-20	25.31%	WP_001092082.1
5 Select seq ref\|WP_001303036.1\|	serine-type D-Ala-D-Ala carboxypeptidase DacD [Enterobacteriaceae]	95.1	95.1	66%	5e-20	26.17%	WP_001303036.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments