Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_000891808.1 helix-turn-helix domain-containing protein [Salmonella] ... Query length: 271 aa

PocR ligand-binding domain-containing protein ...

PocR ligand-binding domain-containing protein [Clostridioides difficile]

551 aa protein

accession:WP_011861418.1

Alignment Sequence Identical proteins

AraC family transcriptional regulator ...

AraC family transcriptional regulator [Enterobacteriaceae]

283 aa protein

accession:WP_000274629.1

Alignment Sequence Identical proteins

response regulator transcription factor ...

response regulator transcription factor [Streptococcus pneumoniae]

428 aa protein

accession:WP_000278864.1

Alignment Sequence Identical proteins

AraC family transcriptional regulator ...

AraC family transcriptional regulator [Pseudomonas aeruginosa]

224 aa protein

accession:WP_003082563.1

Alignment Sequence Identical proteins

Query: helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Salmonella]

271 aa protein

accession:WP_000891808.1

Sequence Identical proteins

AraC family transcriptional regulator ...

AraC family transcriptional regulator [Escherichia coli]

271 aa protein

accession:WP_000891843.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_000891843.1\|	AraC family transcriptional regulator [Escherichia coli]	479	479	100%	3e-172	83.03%	WP_000891843.1
2 Select seq ref\|WP_000278864.1\|	response regulator transcription factor [Streptococcus pneumoniae]	70.1	70.1	41%	2e-12	30.97%	WP_000278864.1
3 Select seq ref\|WP_003082563.1\|	AraC family transcriptional regulator [Pseudomonas aeruginosa]	63.2	63.2	33%	2e-10	38.46%	WP_003082563.1
4 Select seq ref\|WP_011861418.1\|	PocR ligand-binding domain-containing protein [Clostridioides difficile]	62.8	62.8	37%	1e-09	23.53%	WP_011861418.1
5 Select seq ref\|WP_000274629.1\|	AraC family transcriptional regulator [Enterobacteriaceae]	57.4	57.4	36%	3e-08	28.57%	WP_000274629.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments