Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_001054113.1 helix-turn-helix transcriptional regulator [Staphylococcus aureus] ... Query length: 189 aa

helix-turn-helix transcriptional regulator ImmR ...

helix-turn-helix transcriptional regulator ImmR [Bacillaceae]

127 aa protein

accession:WP_003240393.1

Alignment Sequence Identical proteins

helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Clostridioides difficile]

364 aa protein

accession:WP_003435932.1

Alignment Sequence Identical proteins

helix-turn-helix transcriptional regulator ...

helix-turn-helix transcriptional regulator [Clostridioides difficile]

404 aa protein

accession:WP_003436565.1

Alignment Sequence Identical proteins

hypothetical protein ...

hypothetical protein [Microcystis aeruginosa]

43 aa protein

accession:WP_260324447.1

Alignment Sequence Identical proteins

Query: helix-turn-helix transcriptional regulator ...

helix-turn-helix transcriptional regulator [Staphylococcus aureus]

189 aa protein

accession:WP_001054113.1

Sequence Identical proteins

helix-turn-helix transcriptional regulator ...

helix-turn-helix transcriptional regulator [Bacillaceae]

66 aa protein

accession:WP_009966860.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_003240393.1\|	helix-turn-helix transcriptional regulator ImmR [Bacillaceae]	52.4	52.4	31%	8e-08	40.68%	WP_003240393.1
2 Select seq ref\|WP_003435932.1\|	helix-turn-helix domain-containing protein [Clostridioides difficile]	47.8	47.8	32%	3e-05	37.10%	WP_003435932.1
3 Select seq ref\|WP_260324447.1\|	hypothetical protein [Microcystis aeruginosa]	32.7	32.7	11%	0.29	52.38%	WP_260324447.1
4 Select seq ref\|WP_009966860.1\|	helix-turn-helix transcriptional regulator [Bacillaceae]	43.5	43.5	31%	5e-05	32.20%	WP_009966860.1
5 Select seq ref\|WP_003436565.1\|	helix-turn-helix transcriptional regulator [Clostridioides difficile]	41.2	41.2	33%	0.004	35.94%	WP_003436565.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments