Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_001297013.1 tetracycline efflux MFS transporter Tet(C) [Bacteria] ... Query length: 396 aa

hippocampus abundant transcript 1 protein isoform X2 ...

hippocampus abundant transcript 1 protein isoform X2 [Mus musculus]

418 aa protein

accession:XP_011238325.1

Alignment Sequence Identical proteins

hippocampus abundant transcript 1 protein isoform X1 ...

hippocampus abundant transcript 1 protein isoform X1 [Homo sapiens]

468 aa protein

accession:XP_016857573.1

Alignment Sequence Identical proteins

hippocampus abundant transcript 1 protein isoform X1 ...

hippocampus abundant transcript 1 protein isoform X1 [Rattus norvegicus]

418 aa protein

accession:XP_063137173.1

Alignment Sequence Identical proteins

Query: tetracycline efflux MFS transporter Tet(C) ...

tetracycline efflux MFS transporter Tet(C) [Bacteria]

396 aa protein

accession:WP_001297013.1

Sequence Identical proteins

TCR/Tet family MFS transporter ...

TCR/Tet family MFS transporter [Deinococcus radiodurans]

404 aa protein

accession:WP_034349486.1

Alignment Sequence Identical proteins

MFS transporter ...

MFS transporter [Sulfolobus acidocaldarius]

388 aa protein

accession:WP_015385774.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_034349486.1\|	TCR/Tet family MFS transporter [Deinococcus radiodurans]	284	284	94%	2e-91	42.22%	WP_034349486.1
2 Select seq ref\|WP_015385774.1\|	MFS transporter [Sulfolobus acidocaldarius]	128	128	88%	4e-32	28.17%	WP_015385774.1
3 Select seq ref\|XP_011238325.1\|	hippocampus abundant transcript 1 protein isoform X2 [Mus musculus]	116	116	79%	1e-27	27.55%	XP_011238325.1
4 Select seq ref\|XP_063137173.1\|	hippocampus abundant transcript 1 protein isoform X1 [Rattus norvegicus]	116	116	79%	1e-27	27.55%	XP_063137173.1
5 Select seq ref\|XP_016857573.1\|	hippocampus abundant transcript 1 protein isoform X1 [Homo sapiens]	116	116	79%	3e-27	27.55%	XP_016857573.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments