Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_002356028.1 sigma 54-interacting transcriptional regulator [Enterococcus] ... Query length: 961 aa

sigma-54-dependent Fis family transcriptional regulator ...

sigma-54-dependent Fis family transcriptional regulator [Pseudomonas aeruginosa]

625 aa protein

accession:WP_003113000.1

Alignment Sequence Identical proteins

nitrogen regulation protein NR(I) ...

nitrogen regulation protein NR(I) [Shewanella oneidensis]

471 aa protein

accession:WP_011074101.1

Alignment Sequence Identical proteins

transcriptional regulator TyrR ...

transcriptional regulator TyrR [Enterobacteriaceae]

513 aa protein

accession:WP_001295587.1

Alignment Sequence Identical proteins

sigma 54-interacting transcriptional regulator ...

sigma 54-interacting transcriptional regulator [Clostridioides difficile]

944 aa protein

accession:WP_011860845.1

Alignment Sequence Identical proteins

Query: sigma 54-interacting transcriptional regulator ...

sigma 54-interacting transcriptional regulator [Enterococcus]

961 aa protein

accession:WP_002356028.1

Sequence Identical proteins

transcriptional regulator LevR ...

transcriptional regulator LevR [Bacillaceae]

935 aa protein

accession:WP_003229830.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_003229830.1\|	transcriptional regulator LevR [Bacillaceae]	632	632	98%	0.0	37.02%	WP_003229830.1
2 Select seq ref\|WP_011860845.1\|	sigma 54-interacting transcriptional regulator [Clostridioides difficile]	499	499	98%	1e-160	33.92%	WP_011860845.1
3 Select seq ref\|WP_003113000.1\|	sigma-54-dependent Fis family transcriptional regulator [Pseudomonas aeruginosa]	102	102	23%	1e-20	31.90%	WP_003113000.1
4 Select seq ref\|WP_011074101.1\|	nitrogen regulation protein NR(I) [Shewanella oneidensis]	92.4	92.4	29%	5e-18	30.56%	WP_011074101.1
5 Select seq ref\|WP_001295587.1\|	transcriptional regulator TyrR [Enterobacteriaceae]	90.5	90.5	24%	2e-17	31.12%	WP_001295587.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments