Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_003021996.1
RamA family antibiotic efflux transcriptional regulator [Enterobacteriaceae]
...
Query length:
113 aa
DOMAINS: and other(s) domains
...
AraC family transcriptional regulator
...
AraC family transcriptional regulator [Clostridioides difficile]
289 aa protein
accession:WP_011861549.1
Query: RamA family antibiotic efflux transcriptional regulator
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RamA family antibiotic efflux transcriptional regulator [Enterobacteriaceae]
113 aa protein
accession:WP_003021996.1
superoxide response transcriptional regulator SoxS
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superoxide response transcriptional regulator SoxS [Gammaproteobacteria]
107 aa protein
accession:WP_000019358.1
helix-turn-helix domain-containing protein
...
helix-turn-helix domain-containing protein [Escherichia coli]
285 aa protein
accession:WP_000621004.1
MDR efflux pump AcrAB transcriptional activator MarA
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MDR efflux pump AcrAB transcriptional activator MarA [Enterobacteriaceae]
127 aa protein
accession:WP_000091199.1
helix-turn-helix transcriptional regulator
...
helix-turn-helix transcriptional regulator [Bacillaceae]
295 aa protein
accession:WP_003246240.1
DOMAINS: and other(s) domains
...
AraC family transcriptional regulator [Clostridioides difficile]
289 aa protein
accession:WP_011861549.1
RamA family antibiotic efflux transcriptional regulator [Enterobacteriaceae]
113 aa protein
accession:WP_003021996.1
superoxide response transcriptional regulator SoxS [Gammaproteobacteria]
107 aa protein
accession:WP_000019358.1
helix-turn-helix domain-containing protein [Escherichia coli]
285 aa protein
accession:WP_000621004.1
MDR efflux pump AcrAB transcriptional activator MarA [Enterobacteriaceae]
127 aa protein
accession:WP_000091199.1
helix-turn-helix transcriptional regulator [Bacillaceae]
295 aa protein
accession:WP_003246240.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 111 | 111 | 88% | 7e-32 | 48.00% | WP_000019358.1 | |
| 2 | 109 | 109 | 92% | 8e-31 | 45.19% | WP_000091199.1 | |
| 3 | 88.2 | 88.2 | 84% | 6e-21 | 40.00% | WP_011861549.1 | |
| 4 | 86.7 | 86.7 | 94% | 2e-20 | 39.25% | WP_000621004.1 | |
| 5 | 75.5 | 75.5 | 88% | 3e-16 | 39.00% | WP_003246240.1 |