Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_003814221.1 helix-turn-helix domain-containing protein [Bordetella] ... Query length: 79 aa

sigma-54-dependent response regulator transcription factor ZraR ...

sigma-54-dependent response regulator transcription factor ZraR [Escherichia coli]

441 aa protein

accession:WP_000148545.1

Alignment Sequence Identical proteins

Query: helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Bordetella]

79 aa protein

accession:WP_003814221.1

Sequence Identical proteins

Fis family transcriptional regulator ...

Fis family transcriptional regulator [Neisseria]

79 aa protein

accession:WP_002213092.1

Alignment Sequence Identical proteins

DNA-binding transcriptional regulator Fis ...

DNA-binding transcriptional regulator Fis [Shewanella]

101 aa protein

accession:WP_006083371.1

Alignment Sequence Identical proteins

DNA-binding transcriptional regulator Fis ...

DNA-binding transcriptional regulator Fis [Bacteria]

98 aa protein

accession:WP_000462905.1

Alignment Sequence Identical proteins

DNA-binding transcriptional regulator Fis ...

DNA-binding transcriptional regulator Fis [Pseudomonas]

107 aa protein

accession:WP_003121116.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_002213092.1\|	Fis family transcriptional regulator [Neisseria]	88.2	88.2	89%	1e-23	52.11%	WP_002213092.1
2 Select seq ref\|WP_006083371.1\|	DNA-binding transcriptional regulator Fis [Shewanella]	64.7	64.7	88%	4e-14	40.00%	WP_006083371.1
3 Select seq ref\|WP_000462905.1\|	DNA-binding transcriptional regulator Fis [Bacteria]	64.7	64.7	83%	4e-14	40.91%	WP_000462905.1
4 Select seq ref\|WP_003121116.1\|	DNA-binding transcriptional regulator Fis [Pseudomonas]	60.1	60.1	91%	4e-12	40.28%	WP_003121116.1
5 Select seq ref\|WP_000148545.1\|	sigma-54-dependent response regulator transcription factor ZraR [Escherichia coli]	40.8	40.8	44%	3e-04	54.29%	WP_000148545.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments