Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_004147422.1
lysine decarboxylation/transport transcriptional activator CadC [Klebsiella]
...
Query length:
522 aa
DOMAINS: and other(s) domains
...
winged helix-turn-helix domain-containing protein
...
winged helix-turn-helix domain-containing protein [Shewanella oneidensis]
1075 aa protein
accession:WP_011071845.1
response regulator transcription factor
...
response regulator transcription factor [Streptomyces]
300 aa protein
accession:WP_161270116.1
two-component system response regulator MtrA
...
two-component system response regulator MtrA [Mycobacterium]
228 aa protein
accession:WP_003899985.1
phosphate regulon transcriptional regulator PhoB
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phosphate regulon transcriptional regulator PhoB [Shewanella]
229 aa protein
accession:WP_011071727.1
Query: lysine decarboxylation/transport transcriptional activator CadC
...
lysine decarboxylation/transport transcriptional activator CadC [Klebsiella]
522 aa protein
accession:WP_004147422.1
lysine decarboxylation/transport transcriptional activator CadC
...
lysine decarboxylation/transport transcriptional activator CadC [Enterobacteriaceae]
512 aa protein
accession:WP_001187177.1
DOMAINS: and other(s) domains
...
winged helix-turn-helix domain-containing protein [Shewanella oneidensis]
1075 aa protein
accession:WP_011071845.1
response regulator transcription factor [Streptomyces]
300 aa protein
accession:WP_161270116.1
two-component system response regulator MtrA [Mycobacterium]
228 aa protein
accession:WP_003899985.1
phosphate regulon transcriptional regulator PhoB [Shewanella]
229 aa protein
accession:WP_011071727.1
lysine decarboxylation/transport transcriptional activator CadC [Klebsiella]
522 aa protein
accession:WP_004147422.1
lysine decarboxylation/transport transcriptional activator CadC [Enterobacteriaceae]
512 aa protein
accession:WP_001187177.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 679 | 679 | 100% | 0.0 | 66.10% | WP_001187177.1 | |
| 2 | 66.6 | 66.6 | 18% | 2e-10 | 35.05% | WP_011071845.1 | |
| 3 | 55.1 | 55.1 | 16% | 3e-07 | 34.88% | WP_161270116.1 | |
| 4 | 48.9 | 48.9 | 19% | 2e-05 | 34.31% | WP_011071727.1 | |
| 5 | 48.9 | 48.9 | 16% | 2e-05 | 36.36% | WP_003899985.1 |