Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_004248060.1 helix-turn-helix domain-containing protein [Proteus] ... Query length: 281 aa

Query: helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Proteus]

281 aa protein

accession:WP_004248060.1

Sequence Identical proteins

AraC family transcriptional regulator ...

AraC family transcriptional regulator [Enterobacteriaceae]

283 aa protein

accession:WP_000274629.1

Alignment Sequence Identical proteins

AraC family transcriptional regulator ...

AraC family transcriptional regulator [Enterobacteriaceae]

285 aa protein

accession:WP_000646830.1

Alignment Sequence Identical proteins

AraC family transcriptional regulator ...

AraC family transcriptional regulator [Synechocystis salina]

144 aa protein

accession:WP_194019222.1

Alignment Sequence Identical proteins

helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Pseudomonas]

288 aa protein

accession:WP_003084097.1

Alignment Sequence Identical proteins

4-hydroxyphenylacetate catabolism regulatory protein HpaA ...

4-hydroxyphenylacetate catabolism regulatory protein HpaA [Pseudomonas]

303 aa protein

accession:WP_003113010.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_003084097.1\|	helix-turn-helix domain-containing protein [Pseudomonas]	69.3	69.3	37%	3e-12	31.43%	WP_003084097.1
2 Select seq ref\|WP_194019222.1\|	AraC family transcriptional regulator [Synechocystis salina]	52.4	52.4	31%	4e-07	35.23%	WP_194019222.1
3 Select seq ref\|WP_000274629.1\|	AraC family transcriptional regulator [Enterobacteriaceae]	45.1	45.1	29%	5e-04	34.94%	WP_000274629.1
4 Select seq ref\|WP_003113010.1\|	4-hydroxyphenylacetate catabolism regulatory protein HpaA [Pseudomonas]	55.8	55.8	34%	1e-07	31.63%	WP_003113010.1
5 Select seq ref\|WP_000646830.1\|	AraC family transcriptional regulator [Enterobacteriaceae]	37.7	37.7	28%	0.098	28.40%	WP_000646830.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments