Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_005116773.1
AraC family invasion system transcriptional regulator VirF [Enterobacteriaceae]
...
Query length:
262 aa
DOMAINS: and other(s) domains
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4-hydroxyphenylacetate catabolism regulatory protein HpaA
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4-hydroxyphenylacetate catabolism regulatory protein HpaA [Pseudomonas]
303 aa protein
accession:WP_003113010.1
response regulator transcription factor
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response regulator transcription factor [Streptococcus]
245 aa protein
accession:WP_000222616.1
T3SS regulon transcriptional activator ExsA
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T3SS regulon transcriptional activator ExsA [Pseudomonadati]
278 aa protein
accession:WP_003120334.1
Query: AraC family invasion system transcriptional regulator VirF
...
AraC family invasion system transcriptional regulator VirF [Enterobacteriaceae]
262 aa protein
accession:WP_005116773.1
acid stress response transcriptional regulator YdeO
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acid stress response transcriptional regulator YdeO [Enterobacteriaceae]
253 aa protein
accession:WP_000060465.1
helix-turn-helix domain-containing protein
...
helix-turn-helix domain-containing protein [Escherichia coli]
195 aa protein
accession:WP_000558952.1
DOMAINS: and other(s) domains
...
4-hydroxyphenylacetate catabolism regulatory protein HpaA [Pseudomonas]
303 aa protein
accession:WP_003113010.1
response regulator transcription factor [Streptococcus]
245 aa protein
accession:WP_000222616.1
T3SS regulon transcriptional activator ExsA [Pseudomonadati]
278 aa protein
accession:WP_003120334.1
AraC family invasion system transcriptional regulator VirF [Enterobacteriaceae]
262 aa protein
accession:WP_005116773.1
acid stress response transcriptional regulator YdeO [Enterobacteriaceae]
253 aa protein
accession:WP_000060465.1
helix-turn-helix domain-containing protein [Escherichia coli]
195 aa protein
accession:WP_000558952.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 80.5 | 80.5 | 37% | 1e-16 | 40.82% | WP_000060465.1 | |
| 2 | 70.9 | 70.9 | 46% | 2e-13 | 33.33% | WP_000558952.1 | |
| 3 | 51.2 | 51.2 | 90% | 3e-06 | 24.18% | WP_003120334.1 | |
| 4 | 43.1 | 43.1 | 34% | 0.002 | 26.04% | WP_003113010.1 | |
| 5 | 36.2 | 36.2 | 35% | 0.29 | 25.81% | WP_000222616.1 |