Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_005853293.1 helix-turn-helix domain-containing protein [Phocaeicola] ... Query length: 295 aa

GlxA family transcriptional regulator ...

GlxA family transcriptional regulator [Streptomyces]

344 aa protein

accession:WP_003974569.1

Alignment Sequence Identical proteins

HTH-type transcriptional activator RhaS ...

HTH-type transcriptional activator RhaS [Enterobacteriaceae]

278 aa protein

accession:WP_000217135.1

Alignment Sequence Identical proteins

AraC family transcriptional regulator ...

AraC family transcriptional regulator [Clostridioides difficile]

298 aa protein

accession:WP_021373517.1

Alignment Sequence Identical proteins

AraC family transcriptional regulator ...

AraC family transcriptional regulator [Pseudomonas]

342 aa protein

accession:WP_003097554.1

Alignment Sequence Identical proteins

Query: helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Phocaeicola]

295 aa protein

accession:WP_005853293.1

Sequence Identical proteins

helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Bacillaceae]

772 aa protein

accession:WP_009968004.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_009968004.1\|	helix-turn-helix domain-containing protein [Bacillaceae]	45.4	45.4	26%	5e-04	32.05%	WP_009968004.1
2 Select seq ref\|WP_021373517.1\|	AraC family transcriptional regulator [Clostridioides difficile]	43.9	43.9	52%	0.001	27.11%	WP_021373517.1
3 Select seq ref\|WP_000217135.1\|	HTH-type transcriptional activator RhaS [Enterobacteriaceae]	41.2	41.2	26%	0.009	32.05%	WP_000217135.1
4 Select seq ref\|WP_003974569.1\|	GlxA family transcriptional regulator [Streptomyces]	40.8	40.8	26%	0.012	28.21%	WP_003974569.1
5 Select seq ref\|WP_003097554.1\|	AraC family transcriptional regulator [Pseudomonas]	37.7	37.7	29%	0.12	29.55%	WP_003097554.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments