Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_006770592.1 PRD domain-containing protein [Hungatella hathewayi] ... Query length: 896 aa

sigma-54-dependent transcriptional regulator EatR ...

sigma-54-dependent transcriptional regulator EatR [Pseudomonas]

643 aa protein

accession:WP_003114083.1

Alignment Sequence Identical proteins

Query: PRD domain-containing protein ...

PRD domain-containing protein [Hungatella hathewayi]

896 aa protein

accession:WP_006770592.1

Sequence Identical proteins

transcriptional regulator LevR ...

transcriptional regulator LevR [Bacillus]

935 aa protein

accession:WP_003229830.1

Alignment Sequence Identical proteins

sigma 54-interacting transcriptional regulator ...

sigma 54-interacting transcriptional regulator [Clostridioides difficile]

944 aa protein

accession:WP_011860845.1

Alignment Sequence Identical proteins

sigma-54-dependent transcriptional regulator ...

sigma-54-dependent transcriptional regulator [Clostridioides difficile]

855 aa protein

accession:WP_003435945.1

Alignment Sequence Identical proteins

sigma 54-interacting transcriptional regulator ...

sigma 54-interacting transcriptional regulator [Clostridioides difficile]

982 aa protein

accession:WP_009887817.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_003229830.1\|	transcriptional regulator LevR [Bacillus]	320	320	99%	2e-94	27.10%	WP_003229830.1
2 Select seq ref\|WP_011860845.1\|	sigma 54-interacting transcriptional regulator [Clostridioides difficile]	283	283	96%	1e-80	27.68%	WP_011860845.1
3 Select seq ref\|WP_003114083.1\|	sigma-54-dependent transcriptional regulator EatR [Pseudomonas]	48.1	48.1	19%	2e-04	27.01%	WP_003114083.1
4 Select seq ref\|WP_003435945.1\|	sigma-54-dependent transcriptional regulator [Clostridioides difficile]	261	261	70%	1e-73	30.70%	WP_003435945.1
5 Select seq ref\|WP_009887817.1\|	sigma 54-interacting transcriptional regulator [Clostridioides difficile]	240	240	74%	2e-65	29.13%	WP_009887817.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments