Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_007581875.1
sigma-54 dependent transcriptional regulator [Pseudoalteromonas]
...
Query length:
478 aa
DOMAINS: and other(s) domains
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sigma-54 interaction domain-containing protein
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sigma-54 interaction domain-containing protein [Clostridioides difficile]
591 aa protein
accession:WP_021392135.1
DNA-binding transcriptional regulator HyfR
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DNA-binding transcriptional regulator HyfR [Escherichia coli]
670 aa protein
accession:WP_001251535.1
formate hydrogenlyase transcriptional activator FlhA
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formate hydrogenlyase transcriptional activator FlhA [Enterobacteriaceae]
692 aa protein
accession:WP_001301446.1
transcriptional regulator FleQ
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transcriptional regulator FleQ [Pseudomonas]
490 aa protein
accession:WP_003086448.1
Query: sigma-54 dependent transcriptional regulator
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sigma-54 dependent transcriptional regulator [Pseudoalteromonas]
478 aa protein
accession:WP_007581875.1
sigma-54 dependent transcriptional regulator
...
sigma-54 dependent transcriptional regulator [Shewanella oneidensis]
477 aa protein
accession:WP_011073116.1
DOMAINS: and other(s) domains
...
sigma-54 interaction domain-containing protein [Clostridioides difficile]
591 aa protein
accession:WP_021392135.1
DNA-binding transcriptional regulator HyfR [Escherichia coli]
670 aa protein
accession:WP_001251535.1
formate hydrogenlyase transcriptional activator FlhA [Enterobacteriaceae]
692 aa protein
accession:WP_001301446.1
transcriptional regulator FleQ [Pseudomonas]
490 aa protein
accession:WP_003086448.1
sigma-54 dependent transcriptional regulator [Pseudoalteromonas]
478 aa protein
accession:WP_007581875.1
sigma-54 dependent transcriptional regulator [Shewanella oneidensis]
477 aa protein
accession:WP_011073116.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 513 | 513 | 99% | 9e-179 | 56.46% | WP_011073116.1 | |
| 2 | 421 | 421 | 99% | 2e-142 | 51.32% | WP_003086448.1 | |
| 3 | 268 | 268 | 72% | 5e-81 | 41.78% | WP_001251535.1 | |
| 4 | 264 | 264 | 73% | 2e-79 | 43.89% | WP_001301446.1 | |
| 5 | 257 | 257 | 56% | 1e-77 | 46.15% | WP_021392135.1 |