Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_007597938.1 helix-turn-helix transcriptional regulator [Rhizobium sp. PDO1-076] ... Query length: 260 aa

helix-turn-helix transcriptional regulator ...

helix-turn-helix transcriptional regulator [Pseudomonas]

901 aa protein

accession:WP_003120314.1

Alignment Sequence Identical proteins

response regulator transcription factor ...

response regulator transcription factor [Shewanella oneidensis]

220 aa protein

accession:WP_011072594.1

Alignment Sequence Identical proteins

response regulator transcription factor ...

response regulator transcription factor [Streptomyces]

220 aa protein

accession:WP_003977570.1

Alignment Sequence Identical proteins

Query: helix-turn-helix transcriptional regulator ...

helix-turn-helix transcriptional regulator [Rhizobium sp. PDO1-076]

260 aa protein

accession:WP_007597938.1

Sequence Identical proteins

transcriptional regulator LasR ...

transcriptional regulator LasR [Gammaproteobacteria]

239 aa protein

accession:WP_003082999.1

Alignment Sequence Identical proteins

quorum-sensing transcriptional repressor QscR ...

quorum-sensing transcriptional repressor QscR [Pseudomonas]

237 aa protein

accession:WP_003118960.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_003082999.1\|	transcriptional regulator LasR [Gammaproteobacteria]	54.7	54.7	85%	2e-07	24.23%	WP_003082999.1
2 Select seq ref\|WP_003118960.1\|	quorum-sensing transcriptional repressor QscR [Pseudomonas]	52.0	52.0	94%	2e-06	24.70%	WP_003118960.1
3 Select seq ref\|WP_011072594.1\|	response regulator transcription factor [Shewanella oneidensis]	45.8	45.8	24%	1e-04	40.00%	WP_011072594.1
4 Select seq ref\|WP_003977570.1\|	response regulator transcription factor [Streptomyces]	45.1	45.1	20%	3e-04	48.15%	WP_003977570.1
5 Select seq ref\|WP_003120314.1\|	helix-turn-helix transcriptional regulator [Pseudomonas]	48.5	48.5	23%	4e-05	44.26%	WP_003120314.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments