Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_007960112.1
sigma-54-dependent transcriptional regulator [Pelosinus fermentans]
...
Query length:
887 aa
DOMAINS: and other(s) domains
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sigma-54 interaction domain-containing protein
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sigma-54 interaction domain-containing protein [Pseudomonas]
361 aa protein
accession:WP_003115339.1
two-component system response regulator CbrB
...
two-component system response regulator CbrB [Pseudomonas aeruginosa]
478 aa protein
accession:WP_003113914.1
sigma-54-dependent transcriptional regulator
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sigma-54-dependent transcriptional regulator [Shewanella oneidensis]
475 aa protein
accession:WP_011073484.1
transcriptional regulator LevR
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transcriptional regulator LevR [Bacillaceae]
935 aa protein
accession:WP_003229830.1
Query: sigma-54-dependent transcriptional regulator
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sigma-54-dependent transcriptional regulator [Pelosinus fermentans]
887 aa protein
accession:WP_007960112.1
sigma-54-dependent transcriptional regulator
...
sigma-54-dependent transcriptional regulator [Clostridioides difficile]
855 aa protein
accession:WP_003435945.1
DOMAINS: and other(s) domains
...
sigma-54 interaction domain-containing protein [Pseudomonas]
361 aa protein
accession:WP_003115339.1
two-component system response regulator CbrB [Pseudomonas aeruginosa]
478 aa protein
accession:WP_003113914.1
sigma-54-dependent transcriptional regulator [Shewanella oneidensis]
475 aa protein
accession:WP_011073484.1
transcriptional regulator LevR [Bacillaceae]
935 aa protein
accession:WP_003229830.1
sigma-54-dependent transcriptional regulator [Pelosinus fermentans]
887 aa protein
accession:WP_007960112.1
sigma-54-dependent transcriptional regulator [Clostridioides difficile]
855 aa protein
accession:WP_003435945.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 600 | 600 | 98% | 0.0 | 40.07% | WP_003435945.1 | |
| 2 | 420 | 420 | 82% | 2e-131 | 35.25% | WP_003229830.1 | |
| 3 | 103 | 103 | 35% | 2e-22 | 29.41% | WP_003115339.1 | |
| 4 | 105 | 105 | 23% | 3e-22 | 33.80% | WP_003113914.1 | |
| 5 | 97.8 | 97.8 | 35% | 9e-20 | 28.53% | WP_011073484.1 |