Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_008556820.1 TraR/DksA family transcriptional regulator [Leisingera daeponensis] ... Query length: 108 aa

TraR/DksA family transcriptional regulator ...

TraR/DksA family transcriptional regulator [Shewanella oneidensis]

119 aa protein

accession:WP_011072089.1

Alignment Sequence Identical proteins

TraR/DksA C4-type zinc finger protein ...

TraR/DksA C4-type zinc finger protein [Clostridioides difficile]

160 aa protein

accession:WP_003431194.1

Alignment Sequence Identical proteins

TraR/DksA family transcriptional regulator ...

TraR/DksA family transcriptional regulator [Streptomyces]

239 aa protein

accession:WP_011028128.1

Alignment Sequence Identical proteins

RNA polymerase-binding protein DksA ...

RNA polymerase-binding protein DksA [Gammaproteobacteria]

134 aa protein

accession:WP_003097086.1

Alignment Sequence Identical proteins

Query: TraR/DksA family transcriptional regulator ...

TraR/DksA family transcriptional regulator [Leisingera daeponensis]

108 aa protein

accession:WP_008556820.1

Sequence Identical proteins

TraR/DksA family transcriptional regulator ...

TraR/DksA family transcriptional regulator [Pseudomonas]

108 aa protein

accession:WP_003112819.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_003431194.1\|	TraR/DksA C4-type zinc finger protein [Clostridioides difficile]	55.8	55.8	54%	1e-09	45.76%	WP_003431194.1
2 Select seq ref\|WP_011028128.1\|	TraR/DksA family transcriptional regulator [Streptomyces]	45.8	45.8	39%	1e-05	46.51%	WP_011028128.1
3 Select seq ref\|WP_003097086.1\|	RNA polymerase-binding protein DksA [Gammaproteobacteria]	40.8	40.8	89%	4e-04	36.08%	WP_003097086.1
4 Select seq ref\|WP_003112819.1\|	TraR/DksA family transcriptional regulator [Pseudomonas]	40.4	40.4	63%	4e-04	44.93%	WP_003112819.1
5 Select seq ref\|WP_011072089.1\|	TraR/DksA family transcriptional regulator [Shewanella oneidensis]	35.8	35.8	40%	0.023	38.64%	WP_011072089.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments