Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_010883461.1 type III secretion system export apparatus subunit SctS [Chlamydia] ... Query length: 95 aa

SctS family type III secretion system export apparatus subunit PscS ...

SctS family type III secretion system export apparatus subunit PscS [Pseudomonas]

88 aa protein

accession:WP_003087672.1

Alignment Sequence Identical proteins

Query: type III secretion system export apparatus subunit SctS ...

type III secretion system export apparatus subunit SctS [Chlamydia]

95 aa protein

accession:WP_010883461.1

Sequence Identical proteins

flagellar biosynthesis protein FliQ ...

flagellar biosynthesis protein FliQ [Thermotoga]

88 aa protein

accession:WP_004081052.1

Alignment Sequence Identical proteins

flagellar biosynthesis protein FliQ ...

flagellar biosynthesis protein FliQ [Bacillus]

89 aa protein

accession:WP_003220888.1

Alignment Sequence Identical proteins

flagellar biosynthesis protein FliQ ...

flagellar biosynthesis protein FliQ [Gammaproteobacteria]

89 aa protein

accession:WP_000187358.1

Alignment Sequence Identical proteins

flagellar biosynthesis protein FliQ ...

flagellar biosynthesis protein FliQ [Clostridioides difficile]

89 aa protein

accession:WP_009888090.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_004081052.1\|	flagellar biosynthesis protein FliQ [Thermotoga]	66.2	66.2	77%	1e-14	43.24%	WP_004081052.1
2 Select seq ref\|WP_003220888.1\|	flagellar biosynthesis protein FliQ [Bacillus]	60.5	60.5	73%	3e-12	42.86%	WP_003220888.1
3 Select seq ref\|WP_009888090.1\|	flagellar biosynthesis protein FliQ [Clostridioides difficile]	57.8	57.8	67%	3e-11	39.06%	WP_009888090.1
4 Select seq ref\|WP_003087672.1\|	SctS family type III secretion system export apparatus subunit PscS [Pseudomonas]	57.0	57.0	75%	7e-11	41.67%	WP_003087672.1
5 Select seq ref\|WP_000187358.1\|	flagellar biosynthesis protein FliQ [Gammaproteobacteria]	41.2	41.2	56%	9e-05	37.04%	WP_000187358.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments