Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_011860817.1
helix-turn-helix domain-containing protein [Clostridioides difficile]
...
Query length:
278 aa
DOMAINS: and other(s) domains
...
AraC family transcriptional regulator
...
AraC family transcriptional regulator [Streptomyces]
289 aa protein
accession:WP_161270146.1
superoxide response transcriptional regulator SoxS
...
superoxide response transcriptional regulator SoxS [Gammaproteobacteria]
107 aa protein
accession:WP_000019358.1
MDR efflux pump AcrAB transcriptional activator RobA
...
MDR efflux pump AcrAB transcriptional activator RobA [Enterobacteriaceae]
289 aa protein
accession:WP_000371666.1
helix-turn-helix transcriptional regulator
...
helix-turn-helix transcriptional regulator [Bacillaceae]
295 aa protein
accession:WP_003246240.1
Query: helix-turn-helix domain-containing protein
...
helix-turn-helix domain-containing protein [Clostridioides difficile]
278 aa protein
accession:WP_011860817.1
helix-turn-helix domain-containing protein
...
helix-turn-helix domain-containing protein [Clostridioides difficile]
286 aa protein
accession:WP_009895481.1
DOMAINS: and other(s) domains
...
AraC family transcriptional regulator [Streptomyces]
289 aa protein
accession:WP_161270146.1
superoxide response transcriptional regulator SoxS [Gammaproteobacteria]
107 aa protein
accession:WP_000019358.1
MDR efflux pump AcrAB transcriptional activator RobA [Enterobacteriaceae]
289 aa protein
accession:WP_000371666.1
helix-turn-helix transcriptional regulator [Bacillaceae]
295 aa protein
accession:WP_003246240.1
helix-turn-helix domain-containing protein [Clostridioides difficile]
278 aa protein
accession:WP_011860817.1
helix-turn-helix domain-containing protein [Clostridioides difficile]
286 aa protein
accession:WP_009895481.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 561 | 561 | 99% | 0.0 | 99.28% | WP_009895481.1 | |
| 2 | 84.7 | 84.7 | 33% | 2e-19 | 40.43% | WP_000019358.1 | |
| 3 | 84.7 | 84.7 | 47% | 8e-18 | 33.83% | WP_000371666.1 | |
| 4 | 74.3 | 74.3 | 43% | 5e-14 | 37.50% | WP_003246240.1 | |
| 5 | 73.6 | 73.6 | 38% | 9e-14 | 33.04% | WP_161270146.1 |