Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_012274717.1
sigma 54-interacting transcriptional regulator [Pseudomonas]
...
Query length:
276 aa
DOMAINS: and other(s) domains
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phage shock protein operon transcriptional activator
...
phage shock protein operon transcriptional activator [Enterobacteriaceae]
325 aa protein
accession:WP_000852835.1
two-component system response regulator CbrB
...
two-component system response regulator CbrB [Pseudomonas aeruginosa]
478 aa protein
accession:WP_003113914.1
sigma-54 interaction domain-containing protein
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sigma-54 interaction domain-containing protein [Escherichia coli]
592 aa protein
accession:WP_000417831.1
sigma-54 interaction domain-containing protein
...
sigma-54 interaction domain-containing protein [Clostridioides difficile]
346 aa protein
accession:WP_003434073.1
Query: sigma 54-interacting transcriptional regulator
...
sigma 54-interacting transcriptional regulator [Pseudomonas]
276 aa protein
accession:WP_012274717.1
sigma 54-interacting transcriptional regulator
...
sigma 54-interacting transcriptional regulator [Pseudomonas]
324 aa protein
accession:WP_003114309.1
DOMAINS: and other(s) domains
...
phage shock protein operon transcriptional activator [Enterobacteriaceae]
325 aa protein
accession:WP_000852835.1
two-component system response regulator CbrB [Pseudomonas aeruginosa]
478 aa protein
accession:WP_003113914.1
sigma-54 interaction domain-containing protein [Escherichia coli]
592 aa protein
accession:WP_000417831.1
sigma-54 interaction domain-containing protein [Clostridioides difficile]
346 aa protein
accession:WP_003434073.1
sigma 54-interacting transcriptional regulator [Pseudomonas]
276 aa protein
accession:WP_012274717.1
sigma 54-interacting transcriptional regulator [Pseudomonas]
324 aa protein
accession:WP_003114309.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Alignments
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Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 369 | 369 | 94% | 8e-128 | 69.47% | WP_003114309.1 | |
| 2 | 193 | 193 | 82% | 3e-57 | 44.54% | WP_003113914.1 | |
| 3 | 191 | 191 | 84% | 1e-55 | 41.70% | WP_000417831.1 | |
| 4 | 184 | 184 | 78% | 6e-55 | 43.18% | WP_003434073.1 | |
| 5 | 176 | 176 | 76% | 3e-52 | 45.79% | WP_000852835.1 |