Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_016236501.1 efflux RND transporter periplasmic adaptor subunit [Pseudomonadota] ... Query length: 383 aa

efflux RND transporter periplasmic adaptor subunit ...

efflux RND transporter periplasmic adaptor subunit [Shewanella oneidensis]

337 aa protein

accession:WP_011072998.1

Alignment Sequence Identical proteins

secretion protein HlyD ...

secretion protein HlyD [Escherichia coli]

332 aa protein

accession:WP_000976409.1

Alignment Sequence Identical proteins

HlyD family secretion protein ...

HlyD family secretion protein [Pseudomonas]

302 aa protein

accession:WP_003112442.1

Alignment Sequence Identical proteins

efflux RND transporter periplasmic adaptor subunit ...

efflux RND transporter periplasmic adaptor subunit [Pseudomonas aeruginosa]

394 aa protein

accession:WP_003112616.1

Alignment Sequence Identical proteins

Query: efflux RND transporter periplasmic adaptor subunit ...

efflux RND transporter periplasmic adaptor subunit [Pseudomonadota]

383 aa protein

accession:WP_016236501.1

Sequence Identical proteins

multidrug efflux RND transporter subunit MdtA ...

multidrug efflux RND transporter subunit MdtA [Enterobacteriaceae]

415 aa protein

accession:WP_000678969.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_000678969.1\|	multidrug efflux RND transporter subunit MdtA [Enterobacteriaceae]	87.0	87.0	91%	2e-17	28.69%	WP_000678969.1
2 Select seq ref\|WP_000976409.1\|	secretion protein HlyD [Escherichia coli]	56.6	56.6	55%	2e-07	25.39%	WP_000976409.1
3 Select seq ref\|WP_011072998.1\|	efflux RND transporter periplasmic adaptor subunit [Shewanella oneidensis]	50.1	50.1	78%	2e-05	24.44%	WP_011072998.1
4 Select seq ref\|WP_003112442.1\|	HlyD family secretion protein [Pseudomonas]	45.8	45.8	47%	4e-04	28.02%	WP_003112442.1
5 Select seq ref\|WP_003112616.1\|	efflux RND transporter periplasmic adaptor subunit [Pseudomonas aeruginosa]	45.8	45.8	46%	5e-04	24.53%	WP_003112616.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments