Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_016899701.1
TolC family protein [Pseudoalteromonas]
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Query length:
470 aa
DOMAINS: and other(s) domains
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Query: TolC family protein
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TolC family protein [Pseudoalteromonas]
470 aa protein
accession:WP_016899701.1
multidrug efflux RND transporter outer membrane channel subunit OprM
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multidrug efflux RND transporter outer membrane channel subunit OprM [Pseudomonas]
485 aa protein
accession:WP_003084633.1
Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC
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Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC [Escherichia coli]
460 aa protein
accession:WP_000074204.1
Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC
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Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC [Enterobacteriaceae]
457 aa protein
accession:WP_000074234.1
efflux transporter outer membrane subunit
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efflux transporter outer membrane subunit [Shewanella oneidensis]
472 aa protein
accession:WP_011071116.1
multidrug efflux RND transporter outer membrane subunit OprN
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multidrug efflux RND transporter outer membrane subunit OprN [Pseudomonas]
472 aa protein
accession:WP_003113303.1
DOMAINS: and other(s) domains
...
TolC family protein [Pseudoalteromonas]
470 aa protein
accession:WP_016899701.1
multidrug efflux RND transporter outer membrane channel subunit OprM [Pseudomonas]
485 aa protein
accession:WP_003084633.1
Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC [Escherichia coli]
460 aa protein
accession:WP_000074204.1
Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC [Enterobacteriaceae]
457 aa protein
accession:WP_000074234.1
efflux transporter outer membrane subunit [Shewanella oneidensis]
472 aa protein
accession:WP_011071116.1
multidrug efflux RND transporter outer membrane subunit OprN [Pseudomonas]
472 aa protein
accession:WP_003113303.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 120 | 120 | 95% | 3e-28 | 26.46% | WP_003084633.1 | |
| 2 | 89.4 | 89.4 | 97% | 1e-17 | 23.04% | WP_011071116.1 | |
| 3 | 85.5 | 85.5 | 97% | 2e-16 | 24.63% | WP_000074204.1 | |
| 4 | 84.0 | 84.0 | 96% | 5e-16 | 24.95% | WP_000074234.1 | |
| 5 | 108 | 108 | 94% | 5e-24 | 26.48% | WP_003113303.1 |