Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_016930080.1
helix-turn-helix domain-containing protein [Serratia]
...
Query length:
288 aa
DOMAINS: and other(s) domains
...
helix-turn-helix transcriptional regulator
...
helix-turn-helix transcriptional regulator [Bacillaceae]
295 aa protein
accession:WP_003246240.1
helix-turn-helix transcriptional regulator
...
helix-turn-helix transcriptional regulator [Clostridioides difficile]
160 aa protein
accession:WP_009891821.1
MDR efflux pump AcrAB transcriptional activator RobA
...
MDR efflux pump AcrAB transcriptional activator RobA [Enterobacteriaceae]
289 aa protein
accession:WP_000371666.1
superoxide response transcriptional regulator SoxS
...
superoxide response transcriptional regulator SoxS [Gammaproteobacteria]
107 aa protein
accession:WP_000019358.1
Query: helix-turn-helix domain-containing protein
...
helix-turn-helix domain-containing protein [Serratia]
288 aa protein
accession:WP_016930080.1
helix-turn-helix domain-containing protein
...
helix-turn-helix domain-containing protein [Escherichia coli]
285 aa protein
accession:WP_000621004.1
DOMAINS: and other(s) domains
...
helix-turn-helix transcriptional regulator [Bacillaceae]
295 aa protein
accession:WP_003246240.1
helix-turn-helix transcriptional regulator [Clostridioides difficile]
160 aa protein
accession:WP_009891821.1
MDR efflux pump AcrAB transcriptional activator RobA [Enterobacteriaceae]
289 aa protein
accession:WP_000371666.1
superoxide response transcriptional regulator SoxS [Gammaproteobacteria]
107 aa protein
accession:WP_000019358.1
helix-turn-helix domain-containing protein [Serratia]
288 aa protein
accession:WP_016930080.1
helix-turn-helix domain-containing protein [Escherichia coli]
285 aa protein
accession:WP_000621004.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 149 | 149 | 97% | 8e-42 | 32.88% | WP_000371666.1 | |
| 2 | 121 | 121 | 97% | 3e-31 | 30.99% | WP_000621004.1 | |
| 3 | 113 | 113 | 34% | 4e-30 | 49.49% | WP_000019358.1 | |
| 4 | 85.5 | 85.5 | 48% | 4e-19 | 35.71% | WP_009891821.1 | |
| 5 | 71.6 | 71.6 | 35% | 5e-13 | 40.59% | WP_003246240.1 |