Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
WP_020848390.1
efflux RND transporter permease subunit [Aliarcobacter butzleri]
...
Query length:
1026 aa
DOMAINS: and other(s) domains
...
multidrug efflux RND transporter permease subunit MexB
...
multidrug efflux RND transporter permease subunit MexB [Pseudomonas]
1046 aa protein
accession:WP_003107312.1
efflux RND transporter permease subunit
...
efflux RND transporter permease subunit [Thermotoga maritima]
1000 aa protein
accession:WP_004083186.1
efflux RND transporter permease subunit
...
efflux RND transporter permease subunit [Clostridioides difficile]
1044 aa protein
accession:WP_011861545.1
efflux RND transporter permease subunit
...
efflux RND transporter permease subunit [Streptomyces]
1041 aa protein
accession:WP_003976652.1
Query: efflux RND transporter permease subunit
...
efflux RND transporter permease subunit [Aliarcobacter butzleri]
1026 aa protein
accession:WP_020848390.1
efflux RND transporter permease subunit
...
efflux RND transporter permease subunit [Shewanella oneidensis]
1067 aa protein
accession:WP_011071225.1
DOMAINS: and other(s) domains
...
multidrug efflux RND transporter permease subunit MexB [Pseudomonas]
1046 aa protein
accession:WP_003107312.1
efflux RND transporter permease subunit [Thermotoga maritima]
1000 aa protein
accession:WP_004083186.1
efflux RND transporter permease subunit [Clostridioides difficile]
1044 aa protein
accession:WP_011861545.1
efflux RND transporter permease subunit [Streptomyces]
1041 aa protein
accession:WP_003976652.1
efflux RND transporter permease subunit [Aliarcobacter butzleri]
1026 aa protein
accession:WP_020848390.1
efflux RND transporter permease subunit [Shewanella oneidensis]
1067 aa protein
accession:WP_011071225.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 351 | 351 | 98% | 3e-103 | 26.28% | WP_011071225.1 | |
| 2 | 234 | 234 | 94% | 2e-62 | 22.70% | WP_003976652.1 | |
| 3 | 218 | 218 | 97% | 3e-57 | 21.08% | WP_011861545.1 | |
| 4 | 210 | 210 | 99% | 2e-54 | 21.57% | WP_003107312.1 | |
| 5 | 196 | 196 | 98% | 6e-50 | 22.92% | WP_004083186.1 |