Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: WP_024175329.1 HTH-type transcriptional activator RhaR [Enterobacteriaceae] ... Query length: 282 aa

helix-turn-helix domain-containing protein ...

helix-turn-helix domain-containing protein [Pseudomonas]

297 aa protein

accession:WP_003119473.1

Alignment Sequence Identical proteins

AraC family transcriptional regulator ...

AraC family transcriptional regulator [Synechocystis salina]

144 aa protein

accession:WP_194019222.1

Alignment Sequence Identical proteins

HTH-type transcriptional activator RhaS ...

HTH-type transcriptional activator RhaS [Pseudomonadota]

278 aa protein

accession:WP_000217137.1

Alignment Sequence Identical proteins

HTH-type transcriptional activator RhaR ...

HTH-type transcriptional activator RhaR [Escherichia coli]

312 aa protein

accession:WP_001301668.1

Alignment Sequence Identical proteins

Query: HTH-type transcriptional activator RhaR ...

HTH-type transcriptional activator RhaR [Enterobacteriaceae]

282 aa protein

accession:WP_024175329.1

Sequence Identical proteins

HTH-type transcriptional activator RhaR ...

HTH-type transcriptional activator RhaR [Enterobacteriaceae]

282 aa protein

accession:WP_001336056.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_001301668.1\|	HTH-type transcriptional activator RhaR [Escherichia coli]	585	585	100%	0.0	98.58%	WP_001301668.1
2 Select seq ref\|WP_001336056.1\|	HTH-type transcriptional activator RhaR [Enterobacteriaceae]	583	583	100%	0.0	98.58%	WP_001336056.1
3 Select seq ref\|WP_000217137.1\|	HTH-type transcriptional activator RhaS [Pseudomonadota]	161	161	93%	5e-47	35.71%	WP_000217137.1
4 Select seq ref\|WP_194019222.1\|	AraC family transcriptional regulator [Synechocystis salina]	69.3	69.3	34%	3e-13	30.61%	WP_194019222.1
5 Select seq ref\|WP_003119473.1\|	helix-turn-helix domain-containing protein [Pseudomonas]	67.8	67.8	48%	1e-11	28.28%	WP_003119473.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments